Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_0251 |
Symbol | |
ID | 5745787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 282701 |
End bp | 283612 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641295313 |
Product | 5-dehydro-4-deoxyglucarate dehydratase |
Protein accession | YP_001561282 |
Protein GI | 160895700 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCCC AAGACCTCAA AGACGTGATG AGTTCCGGCC TGCTGTCCTT CCCCGTGACG GACTTCGACA GCAACGGCAA CTTCAATGCC AAGGGCTATG CGGCCCGCCT CGAATGGCTG GCCCCCTACG GCGCCAGCGC GCTGTTCGCG GCAGGCGGCA CGGGCGAGTA CTTCTCGCTG TACGGCGAGG AATACGGCCA GATCATCAAG ACCGCCGTGG ACACCTGCCG CGGCAAGGTG CCCATCATCG CGGGCGCCGG CGGCCCCACG CGCACGGCGA TTGCCCATGC CCAGGAAGCG GAGCGCCTGG GCGCCCACGG CGTCCTGCTG CTGCCCCACT ACCTGACCGA AGCCGGCCAG GAAGGCCTGA TCGCCCATGT GGAGCAGGTC TGCAAGAGCG TGAAGTTCGG CGTCATCGTC TACAACCGCG ACCGCACCCG CTTCACGCCC GAATCGCTGG CCATCCTGGC CGAGCGCTGC CCCAACCTGG TGGGCTTCAA GGACGGCATG GGCAACATCG AGACCATGTC CGCCATCTTC ATGAAGATGG GCGACCGCTT CGCCTACCTG GGCGGCCTGC CCACGGCCGA GGTCTATGCG GCCGCCTACA AGGCCCTGGG CACGCCGGTG TACTCCTCGG CCGTCTTCAA CTTCATCCCC AAGACGGCGA TGGCGTTCTA CGAAGCCGTG CGCACCGACG ACATGGCCAC GCAGCACAAG CTGCTCAAGG AATTCTTCAT GCCCTACCTG AAGATCCGCA ACCGCGTCGA AGGCTACGGC GTGAGCATCA TCAAGGCCGG CGCCAAGCTG GTCGGCCACG ACGCAGGCCC CGTGCGCGCC CCGCTGACGG ACCTCAAGCC CTCCGAGCTG GAAGAGCTCA AGGCCCTGAT CGACAAGCTC GGCCCGCAAT AA
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Protein sequence | MTPQDLKDVM SSGLLSFPVT DFDSNGNFNA KGYAARLEWL APYGASALFA AGGTGEYFSL YGEEYGQIIK TAVDTCRGKV PIIAGAGGPT RTAIAHAQEA ERLGAHGVLL LPHYLTEAGQ EGLIAHVEQV CKSVKFGVIV YNRDRTRFTP ESLAILAERC PNLVGFKDGM GNIETMSAIF MKMGDRFAYL GGLPTAEVYA AAYKALGTPV YSSAVFNFIP KTAMAFYEAV RTDDMATQHK LLKEFFMPYL KIRNRVEGYG VSIIKAGAKL VGHDAGPVRA PLTDLKPSEL EELKALIDKL GPQ
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