Gene Daci_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0236 
Symbol 
ID5745772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp267107 
End bp267793 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content73% 
IMG OID641295298 
ProductGntR family transcriptional regulator 
Protein accessionYP_001561267 
Protein GI160895685 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCTG TAAGCCCCCA GCACATTGCC GAGCGCGTCG TCGAAGCCAT CCTGGCCCAG 
AAACTGGCGC CCGGCGAACG GCTGGGGGAG CAGGAGCTGG CCGACAACTT CGCGGTCAGC
CGCACCATGG TGCGCGAGGC GCTGATGCAG CTGCAGGCGC GCGGCTTCGT GCAGGTGCAG
CCCCGGCGCG GCTGGTACGT GGTCCAGCCC TCGGCCGAGG AGGCGCAGGA CGCCTTCGCG
GCGCGCCGCA TCATCGAGAC CGGCATCCTG GGCGAGGCCG GCCGCCCGAT GCAAAGCGTG
ATCGGCCAGC TGCGCCGCCA CATCGCCCAG GAGCAGGACG CCATTGCCGG CGCCGACGCG
GCCACGCGCG CCTTCCTGCT GGCCGACTTC CACGTCTGCC TGGCCGAGCA GATGGGCCAC
CGCCTGCTGG CGCTCACCCT GCGCGACCTC ACGGCGCGCA CCACGCTGGC GGCCACATTG
TTCCAGTCCA CGCACAGCGC CAGCCAGTCC TGCGCCGAGC ACGAGCGCAT CGTCGAGGCG
CTGGAGCGCG GCGACACCGA GGGCGCCAAG GCCCTGCTGC TGGAGCACAT CGGCACGGTG
GAGCGCTCGC TGGAGATCCG CCCGCCCGAG GCGCCCGACG CCAGCGACCG CCTGCGCGCC
ACGCTGGCGC CCCTGTTCGG GGGATAA
 
Protein sequence
MTPVSPQHIA ERVVEAILAQ KLAPGERLGE QELADNFAVS RTMVREALMQ LQARGFVQVQ 
PRRGWYVVQP SAEEAQDAFA ARRIIETGIL GEAGRPMQSV IGQLRRHIAQ EQDAIAGADA
ATRAFLLADF HVCLAEQMGH RLLALTLRDL TARTTLAATL FQSTHSASQS CAEHERIVEA
LERGDTEGAK ALLLEHIGTV ERSLEIRPPE APDASDRLRA TLAPLFGG