Gene Daci_0195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0195 
Symbol 
ID5745731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp222541 
End bp223488 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content70% 
IMG OID641295257 
Product3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase 
Protein accessionYP_001561226 
Protein GI160895644 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGGCTG TTGGTATTGC GCCAGCGCAA TCAATTACCG AGATGACCCG TTCCATGACC 
ATTCGCTATG ACCACCTGAA ACAGCGCCCC TTCGAGCCCG TGCGCCAGCA CTATGGCGAG
CGCGACACCA TGCTCTATGC ATTGAGCCTG GGCCTGGGCA GCGATCCGCT GTGCGCCGAC
GCCCTGCCCT TTTTCTACGA AGGGGCGCCC GGCGGGCTGC GCGCCCTGCC CTCGCAGGCC
GTGGTGCTGG GCTACCCGGG CTTCTGGGCG CGCGAGGCCG ATACGGGCAT CGACTGGGTG
AAGCTGCTGC ATGGCGAGCA GCGCATGCGG CTGCACCGCC CGCTGCCGGC CAGCGCCGAC
GTGGTGGGCC ACAACCGCAT CACGCACCTG ACGGACAAGG GTGAGGGCAA GGGCGCCATC
ATGGTCACCG AGCGGCGCCT GGAGACCGCC GGCGGCGAGC TGCTGGCCAC CGTGCAGCAG
GTCAGCTTTC TGCGCGGCGA TGGCGGCTAC AGCCTGCTGG ACGGCGGCCA GCCAAGCGAC
GCGCCCCTGG CGCCGCTGCG CCCCACGCCG GAGGACCGCG CGCCCGACTT CACCGACACC
CAGGCCATAC GCCCTGAGGC CGCGCTGCTG TACCGCCTGA TGGGCGACTA CAACCCGCTG
CATGCCGACC CGGCCGTGGC GCGCAAGGCC GGCTTCGAGC GGCCCATCCT GCATGGCCTG
GCCAGCTACG GTCTGGTGGC CCATGCCGTG CTGCGCCAAT GCGGCGACCG CAATCCCGCG
CGCCTGAAGG CGCTGGATGT GCGCTTCACC GCGCCCGTCT ATCCTGGCGA AACCCTGGTC
ACCGAGATCT GGCGCACGCC CGATCAGCCC TGCCAGCTGC AACTGCGCGC CCGCGTGCTC
GAACGTGACA AGGTCGTTCT GAGCCACGGC TACGCCGAAC TCGCCTGA
 
Protein sequence
MKAVGIAPAQ SITEMTRSMT IRYDHLKQRP FEPVRQHYGE RDTMLYALSL GLGSDPLCAD 
ALPFFYEGAP GGLRALPSQA VVLGYPGFWA READTGIDWV KLLHGEQRMR LHRPLPASAD
VVGHNRITHL TDKGEGKGAI MVTERRLETA GGELLATVQQ VSFLRGDGGY SLLDGGQPSD
APLAPLRPTP EDRAPDFTDT QAIRPEAALL YRLMGDYNPL HADPAVARKA GFERPILHGL
ASYGLVAHAV LRQCGDRNPA RLKALDVRFT APVYPGETLV TEIWRTPDQP CQLQLRARVL
ERDKVVLSHG YAELA