| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0165 |
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| Symbol | |
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| ID | 5745701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 186596 |
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| End bp | 188029 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641295227 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001561196 |
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| Protein GI | 160895614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGA TACGCAAGTC CCTGAGCCGC CACGCGCTGG CGCTGGCATC CGCCGCCCTG
GTGGGCGGCT GCGCGGTCGG CCCCGACTTC AAGGCGCCTG CGGCGCCGCG GGCCGCAGCG
CAGTTCGCGC GGGCCGAGCC TGCACCGGCC ACCCCGCAGG CCGAGCCCGA TGCCGCCTTC
TGGCGCCAGT TCCAGGACCC GCAGCTGACG CAACTGGTGG AGCGCGCGCT GGGCGACAAC
CAGGACCTGC AGGTGGCGCT GGCGCGGCTG GACGGTGCCC AGGCGCTGCT GCGCGAAAGC
CGCTTCGACC AGCTGCCCAC GGTCACGATG TCGGGCCGGG CCACGCAGCA AAAGCTCAGC
GAGAGCGAGG CCTTCTATGG CCCGCGCAGC CAGCGCAGCT ACACGGCCGG ATTGGCCGCC
AGCTGGGAGA TCGACGTGTT CGGCCGCGTG CGGCGCAGCA TCGAGGCGCG GCATGCCGAC
CTGCGCGCCG ATGCGGCCGA CCTGGCGGCC CTGCAGGTGG CCATTGCGGC CCAGGTGGCG
GGCAGCTACG CCGACCTGCG CGGCTGGCAG CAGCGCCTGG CCTTGGCGCA GGCCAATGCG
GCCAACCAGC AGGACACGCT GCGCCTGGTG CAGCTGCGCC TGGCGCACGG CAGCGGCACC
GAGTTCGACC TGGCGCGCGC CCAGGCCCAG CTGGAGGCCA CGCGCTCGCG CATTCCCGCG
CTGCAGGCGC AGATCGCCAT GGCGCAGCAC CGGTTGGCCG TGCTCACGGG CCAGGTGCCC
GAGGCGCTGA TTGCCGTGCT GGATGTGCCT GCCGCCCTGC CGCAGCTGCC GCCGGCCATC
GACCCCGGCA CGCCGGCCGG CCTGCTGCGC CGGCGCCCGG ACGTGGCCGT GGCCGAGGCA
CGGCTGCATG CGGCCACGGC ACGCATCGGC GTGGCCACGG CCGACCTGTT CCCGCGCCTG
TCGCTGGGCG GCCTGCTGGG CAGCACGGCG TTGCACGGCG GCTCGCTGTT CGAGGGCGCC
AGCGCCCGCA GCAGCGTGTT CCTGGGCGTG GACTGGTCCT TTCTCGACGT GGGCCGCGTG
CGGGCGCGCA TCGCGGCCAG CGAGGCCGGC GCCCAGGCCG CGCTGGCCCA GTACCAGCAG
ACCGTGCTGC TGGCGCTGGA GGACACGGAG AACGCCCTTG TGCGCCTGCA GCGCACGCGC
AGCGAAGACG CCCACCTGGC CCAGGCCGCC GAGCAGCGCC AGCGTGCCGA GCAACTGGCG
CAGCGCCGCT ACCAGCTGGG CAGCGTGGGC CTGTACGAAG TGCTGGATGC GCAGCGCGAC
CTGTATGCGG CCCAGGACGC GGCCGCCGAC AGCCGTGCGC GCGGCCTGCG CGCCGCCGTG
GCGCTGTACC AGGCCCTGGC CGGCGGCTGG GACGGAAAGC TGCCGCCGGC CTGA
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| Protein sequence | MPEIRKSLSR HALALASAAL VGGCAVGPDF KAPAAPRAAA QFARAEPAPA TPQAEPDAAF
WRQFQDPQLT QLVERALGDN QDLQVALARL DGAQALLRES RFDQLPTVTM SGRATQQKLS
ESEAFYGPRS QRSYTAGLAA SWEIDVFGRV RRSIEARHAD LRADAADLAA LQVAIAAQVA
GSYADLRGWQ QRLALAQANA ANQQDTLRLV QLRLAHGSGT EFDLARAQAQ LEATRSRIPA
LQAQIAMAQH RLAVLTGQVP EALIAVLDVP AALPQLPPAI DPGTPAGLLR RRPDVAVAEA
RLHAATARIG VATADLFPRL SLGGLLGSTA LHGGSLFEGA SARSSVFLGV DWSFLDVGRV
RARIAASEAG AQAALAQYQQ TVLLALEDTE NALVRLQRTR SEDAHLAQAA EQRQRAEQLA
QRRYQLGSVG LYEVLDAQRD LYAAQDAAAD SRARGLRAAV ALYQALAGGW DGKLPPA
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