Gene Daci_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0114 
Symbol 
ID5745650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp122441 
End bp124306 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content66% 
IMG OID641295176 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_001561145 
Protein GI160895563 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC CCGTCATGCA AGGCCTGAAC ATCCAGGCCC CTGCCTACGT CAAGAACAGC 
CGCCTGATCG CCTGGGTGGC CGAGATGGCC GCACTGTGCA AGCCCGCCAA GATCCATTGG
TGCGACGGCT CCCAGGAAGA GTACGAGCAG CTGTGCCAGC AGCTCGTCGA TGCCGGCACC
TTCAAGAAGC TCGATCCCGT CAAGCGCCCC GGCAGCTACC TGGCCTGGTC CGACCCGTCC
GACGTGGCAC GCGTCGAGGA CCGCACCTAC ATCTGCTCGG CCAACAAGGA AGATGCGGGC
CCGACCAACA ACTGGATGGC CCCGAACGAG ATGCGCGCCA CGCTGCAGCC GCTGTTCGAC
GGCTGCATGG CCGGCCGCAC CATGTATGTG GTGCCTTTCT CCATGGGCCC GCTGGGCTCG
CCCATCGCCC ACGTGGGCGT GGAGCTGTCC GACAGCGCCT ACGTGGCCGT CAACATGAAG
ATCATGACCC GCATGGGCCG TGCCGTGTAT GACGTGATCG GCGTGGAAGG CGAGTTCGTT
CCCTGCGTGC ACACCGTGGG CGCGCCCCTG GCCGAAGGCG AGAAGGACCA GACCAGCTGG
CCCTGCAACA AGACCAAGTA CATCGTCCAC TACCCCGAGA CGCGCGAAAT CTGGAGCTAT
GGCTCGGGCT ACGGCGGCAA CGCCCTGCTG GGCAAGAAGT GCTTTGCGCT GCGCATCGCC
TCCACCATGG GCCGCGACCA GGGCTGGCTG GCCGAGCACA TGCTCATCCT GGGCGTGACC
AGCCCCCAGG GCAAGAAGTA CCACGTGGCT GCGGCCTTCC CCAGCGCCTG CGGCAAGACC
AATTTCTCGA TGCTGGTGCC GCCCAAGGTC TTCGAAGGCT GGAAGGTCAC CACCATCGGC
GACGACATCG CCTGGATCAA GCCCCAGGCC GACGGCTCGC TGCGCGCCAT CAACCCCGAA
GCCGGCTACT TCGGCGTGGC CCCGGGCACG AACTACCACA CCAACCCCAA CTGCATGGCC
AGCCTCGACA AGAACGTGAT CTTCACGAAC GTCGCGCTGA CCGATGACAA CGACGTGTGG
TGGGAAGGCA TGGACAAGGA CACCGGCAAG CAGCCCGATC ACCTGATCGA CTGGCAAGGC
AAGGACTGGA CGCCCCAGAT CGCCCGCGAG ACCGGCGCCA AGGCCGCCCA CCCCAATGCC
CGCTTCACCG TGGCCGCGAC CAACAACCCC GCGCTGGACG AAGCCTGGGA CGATCCCAAG
GGCGTGAAGA TCGACGCCAT CATCTTCGGC GGCCGCCGCT CCACCACCGT GCCGCTGGTG
ACCGAGGCCC GCAACTGGAC CGAAGGCGTC TACATGGCCG CCACCATGGG TTCGGAAACC
ACGGCCGCCG CCTTCGGCGC CCAGGGCGTG GTGCGCCGCG ACCCCTTCGC CATGCTGCCG
TTTGCCGGCT ACAACATGAG CGACTATTTC CAGCACTGGC TCACGCTGGG CGCCAAGATC
GAAGGCCAGG GCGCCGTCCT GCCCAAGATC TTCACCACCA ACTGGTTCCG CAAGAACGCC
GACGGCAAGT TCGTCTGGCC CGGCTACGGC GAGAACATGC GCGTGCTGAA GTGGATGATC
GACCGCCTCG AAGGCCAGGC ACAGGGCGAG CAGACAGCCT TCGGCATTGC GCCCCAGTAC
GCCGAGATCA ACTGGACCGG CCTGGACTTC TCCGCAGACC AGTTCGCCAG CGTGACCAGC
ATCGACAAGG CCGCCTGGGC CGAGGAAATG CAGCTGCACA CCGAGCACTT CGACAAGCTG
GCCCACAAGC TGCCCCAGGA GCTGCTGGTG ACCAAGGCCG AACTAGAAAA GCGCTTGGCG
GCCTGA
 
Protein sequence
MNAPVMQGLN IQAPAYVKNS RLIAWVAEMA ALCKPAKIHW CDGSQEEYEQ LCQQLVDAGT 
FKKLDPVKRP GSYLAWSDPS DVARVEDRTY ICSANKEDAG PTNNWMAPNE MRATLQPLFD
GCMAGRTMYV VPFSMGPLGS PIAHVGVELS DSAYVAVNMK IMTRMGRAVY DVIGVEGEFV
PCVHTVGAPL AEGEKDQTSW PCNKTKYIVH YPETREIWSY GSGYGGNALL GKKCFALRIA
STMGRDQGWL AEHMLILGVT SPQGKKYHVA AAFPSACGKT NFSMLVPPKV FEGWKVTTIG
DDIAWIKPQA DGSLRAINPE AGYFGVAPGT NYHTNPNCMA SLDKNVIFTN VALTDDNDVW
WEGMDKDTGK QPDHLIDWQG KDWTPQIARE TGAKAAHPNA RFTVAATNNP ALDEAWDDPK
GVKIDAIIFG GRRSTTVPLV TEARNWTEGV YMAATMGSET TAAAFGAQGV VRRDPFAMLP
FAGYNMSDYF QHWLTLGAKI EGQGAVLPKI FTTNWFRKNA DGKFVWPGYG ENMRVLKWMI
DRLEGQAQGE QTAFGIAPQY AEINWTGLDF SADQFASVTS IDKAAWAEEM QLHTEHFDKL
AHKLPQELLV TKAELEKRLA A