Gene Daci_0089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0089 
Symbol 
ID5745625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp98869 
End bp99897 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content73% 
IMG OID641295152 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001561121 
Protein GI160895539 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGACG ATTTGTTTGC CGATGCCGCA CGCCAGCTGC TGCAGGGCGA GTGCACGCCC 
GCGCGGGTGC GCGCCATCGA GGCCGGGGGT TCGCCCCGGG CGCTGTGGCA ATCGCTGGAG
CAGGCCGGCT TTGCCGATGC CCTGGTGCCT GAGCACGCGG GCGGCGCGGG GCTGGCGCTG
GCGCAGCTGT TCGATGTGTG GTCGCAGGCC GGCGCCCATG CGCTGCCCGT GCCGCTGGGC
GAAACCATGC TGGCGCGCGC GCTGCTGGCG GGCGCGGGGG CGGAGCGTCC ACCAGGCGCC
ATCGCGTTGG TGCAAGGCCT GCTCCAGCCG GATGGCAGCC TGCACTGCGA ACCCGTGCGC
CTGGGCGCGG TGGCGGACAG CGTGCTGGTG CAGCATGCGC AGGGCTGGAG CCTGCTGCCC
GTGGCGCAGG CGCAGTCCAA GCCGGCGGCC TTCTGCCTGG ACGTGAACCT GCGCTGGAGC
GCCGAGCAGG TCCGCGCGGC GCCTGCTCCC GCTATCGCCC TGCCGGGTGG GCTGGACCTG
CGCACGCTGC AGGCCGGCCT GGTGGCGGCG CAGCTCGCGG GCGCACTCAT GGAGGTGTTC
CAGCGCACGC TGCAGTACGC GAATGACCGC CAGCAGTTCG GCCGCCCCAT CGGCAAGTTC
CAGGCCATTC AGCACCAGCT GGCGGTGATG AGCGAGCATG TCTTCGCCGC GCGCATGGCC
GCCCGGCTGG GCTGCGCGGG GCAGGGCATC TTCCCTGAGC GGCTGCGCGT GGCCGTGGCC
AAGGCGCGCT GCAGCCAGGC TGCGCTGGCC GTGGCCGAGG CAGCCCACGC CATCCACGGC
GCCATGGGCT TCACCGAGGA ATACGACCTG CAACTGCTCA CGCGCCGCCT GCATGCCTGG
CGCCAGACGG CTGGCTCCGA GTCGTACTGG CATGGCGTGG CGGGTGCCGC GCTGGTCCAT
GGCCACGCGG GCAGCACCCT GGATCTGATC CGCTCCACCA CCGATATCAC CGCCGATATC
ACCGCCTGA
 
Protein sequence
MEDDLFADAA RQLLQGECTP ARVRAIEAGG SPRALWQSLE QAGFADALVP EHAGGAGLAL 
AQLFDVWSQA GAHALPVPLG ETMLARALLA GAGAERPPGA IALVQGLLQP DGSLHCEPVR
LGAVADSVLV QHAQGWSLLP VAQAQSKPAA FCLDVNLRWS AEQVRAAPAP AIALPGGLDL
RTLQAGLVAA QLAGALMEVF QRTLQYANDR QQFGRPIGKF QAIQHQLAVM SEHVFAARMA
ARLGCAGQGI FPERLRVAVA KARCSQAALA VAEAAHAIHG AMGFTEEYDL QLLTRRLHAW
RQTAGSESYW HGVAGAALVH GHAGSTLDLI RSTTDITADI TA