| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0060 |
|---|
| Symbol | |
|---|
| ID | 5745596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 64674 |
|---|
| End bp | 65963 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641295123 |
|---|
| Product | glutamate carboxypeptidase |
|---|
| Protein accession | YP_001561092 |
|---|
| Protein GI | 160895510 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCCG CCTTCGCACC GCTTTCCCTC ATGTTCCGCA GCGCCCCGCT GGCGCTGGCC
CTTGCCATGG CCGGCCTGTC CGGCAGTGCC CTGGCTGCGC CCAAGGCCGA TATCCAGGCG
CTGGCGCAAA AGCACCAGCA GCCCTTGCTG GACACGCTGC GCGACCTGGT GCACATCGAG
TCGGGCAGCA AGGACATGGA GGGCGTGGAA CAGATCGCCA ACTACGTGGC CGGCAAGCTG
CGCGAGCAGG GCGGCAAGGT CGAGATCCTG CAGCCCACCG ACGTCTACCG GCTGGGCGAC
ACGCCCGAGA AGATCGGCCC CATGGTGCAT GCCGAGTTCA AGGGCAAGGG CACCAGCCGC
ATCATGCTGA TCGCCCACAT GGACACGGTC TACCTGCGCG GCATGCTCAA GGACCAGCCG
TTTCGCATCG ATGGCGAGCG CGCCTACGGC CTGGGCATTG CCGACGACAA GCAGGGCGTG
GCCCTGATCC TGCACACCGT GGCCATGCTG CGCCAGCTGG GCTTCGACAA CTACGGCACG
CTGACCGTGC TGATGAACAG CGACGAGGAA ATCAGCTCGC CCGGCGCGCG CAGCACCATC
ACGCGCATGG GCGCCGAGCA GGATGCGGTC TTCTCGTTCG AAGGCGGCGG CACCGACGGC
GGCGTGCGCC TGGCCACCAG CGGCATCGGC GCGGCCTACC TCAAGGTCGA GGGCAAGGCC
TCGCACGCGG GCGCCAAGCC CGAGGACGGC GTGAACGCGC TGTACGAACT GTCGCACCAG
CTGCTGCAGA TGAAGGACCT GTCCAAGCCC GAGACCGGCC TCAAGCTCAA CTGGACCGTG
GCCAAGGCCG GCACCAACCG CAACGTCATT CCCGCCGAGG CCACGGCCCA GGCCGACGCC
CGCGCGCTGC GCGTGGCCGA CTTCACGGCG CTGGAGCAGG CCATGCAGGC CAAGGTGGGC
CACAAGCTGC TGGACGCCAG CAAGGTGCAG CTCAAGTTCG AAGTGCGCCG CCCGCCGCTG
GAGGCCAACG AGGCCTCGCG CAGCCTGGCC AAACAGGCGC AGACCATCTA CAGCGATGAG
CTGGGCCTGA AGATGAGCGT GATGGAAAAG GCCACGGGCG GCGGCACCGA CGCGGCGTTT
GCGGCGCTCA AGGCCAAGGG TGCGGTCATC GAGGGCTTTG GCCTGAGCGG CTACGGCGCG
CACTCCAATG ATGCGGAGTA TGTGCAGCTG AACACCATCG TGCCGCGCCT GTACCTGGCC
ACGCGCATGA TCATGGATCT GTCGAAGTAG
|
|---|
| Protein sequence | MRSAFAPLSL MFRSAPLALA LAMAGLSGSA LAAPKADIQA LAQKHQQPLL DTLRDLVHIE
SGSKDMEGVE QIANYVAGKL REQGGKVEIL QPTDVYRLGD TPEKIGPMVH AEFKGKGTSR
IMLIAHMDTV YLRGMLKDQP FRIDGERAYG LGIADDKQGV ALILHTVAML RQLGFDNYGT
LTVLMNSDEE ISSPGARSTI TRMGAEQDAV FSFEGGGTDG GVRLATSGIG AAYLKVEGKA
SHAGAKPEDG VNALYELSHQ LLQMKDLSKP ETGLKLNWTV AKAGTNRNVI PAEATAQADA
RALRVADFTA LEQAMQAKVG HKLLDASKVQ LKFEVRRPPL EANEASRSLA KQAQTIYSDE
LGLKMSVMEK ATGGGTDAAF AALKAKGAVI EGFGLSGYGA HSNDAEYVQL NTIVPRLYLA
TRMIMDLSK
|
|---|
| |