Gene Daci_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0059 
Symbol 
ID5745595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp63263 
End bp64516 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID641295122 
Productmajor facilitator transporter 
Protein accessionYP_001561091 
Protein GI160895509 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGACG CCGTGGCTCC GGACCCGCTG CGCAGCGATG TGCGCACCAT CGGCCTGATC 
GGCCTGGCGC ATGGTTCCTC GCATTTCTTC CACCTGCTGC TGCCGCCGCT GTTCCCGTGG
CTGATCGCCG AGTTCGGCTA CAGCTATGCC GAACTCAGCG TGATGGTGTC GCTGTTCTTC
GTGGTCTCCG GCGTGGGACA GGCCATGGCC GGCTTTGCCG TGGACCGCTT CGGCGCGCGC
CCCATTCTGT TTGCGGCGCT GGGCAGCTTC ACCGTGGCGG GCGTGGTCGC CAGCCTGGCA
CAGGGCTATG GAATGCTGCT GCTGGCAGCC TTCTTCGCGG GCCTGGGCAA TGCGCCCTTC
CACCCGGTGG ACTTCACCAT CCTCAACAAG CGCGTGTCGG CCAAGCGCAT CGGCCATGCG
TTCTCGGTGC ACGGCCTGTC GGGCAATATC GGCTGGGCGC TGGCGCCGCT GTTCATGGCG
GGCATCACCA CGGCCACGGG CTCGTGGCGC CTGGCCTGCC TGTGCGGCGC GGCCCTGGCC
GCCGTCATCC TCACCATCAT GGTGCTCAAC CGCGAGGCGC TGGACGACCG TGCCGCCGAT
GCCCACGCCC CCGCGGCGCG CGCCGCTGCG GCCGCCGTGC CGCAGGAGCA TCCCATGGCC
TTCCTGAAGC TGCCCTCGGT CTGGCTGTGC TTCTCGTTCT TCTTCTGGAG CACCTGCGCG
CTCAGCGCCA TCCAGAGCTT TGCCAGCCCC GCCATGCAGT CCATGTACGG ACTGCCGCTG
AGCGTGACGG CGCTGATCGT CACGGGCTAC ATGCTGTGCG GCGCGGCAGG CATGCTGGCC
GGCGGCTTCC TCGTGGGCCG CGTGCAGCGG CTGGAGAAGG TGATCTCCAT CTGCATGCTG
GGCTCGGGCG TTGCGCTGTT CCTGGTCGGC ACGGGCTGGC TGCCGGCCAT GGCGGCCGTG
GCCGTGGCCT CCATCGCGGG CCTGGGAACG GGCCTGGCCG GCCCATCGCG CGACATGCTG
ATCAAGCGCG CCGCGCCGCC CGGCGCCACG GGTCGCGTCT ACGGCACGGT GTATTCGGGC
CTGGACCTGG GCTTTTGCCT GGCCGCGCCG GTGTTCGGCT ACATGCTGGA CCACGGCATG
AGTCACGGCG TGTTCTACGG ATCGGCCATT GCCCTGGTGC TGAGCGTGGT GTCGGCCGTG
GTCGTGGGAG ATGGCGTGAG CAAGAAGGGC GGCATGGCGC TGAGCGCGGG CTGA
 
Protein sequence
MPDAVAPDPL RSDVRTIGLI GLAHGSSHFF HLLLPPLFPW LIAEFGYSYA ELSVMVSLFF 
VVSGVGQAMA GFAVDRFGAR PILFAALGSF TVAGVVASLA QGYGMLLLAA FFAGLGNAPF
HPVDFTILNK RVSAKRIGHA FSVHGLSGNI GWALAPLFMA GITTATGSWR LACLCGAALA
AVILTIMVLN REALDDRAAD AHAPAARAAA AAVPQEHPMA FLKLPSVWLC FSFFFWSTCA
LSAIQSFASP AMQSMYGLPL SVTALIVTGY MLCGAAGMLA GGFLVGRVQR LEKVISICML
GSGVALFLVG TGWLPAMAAV AVASIAGLGT GLAGPSRDML IKRAAPPGAT GRVYGTVYSG
LDLGFCLAAP VFGYMLDHGM SHGVFYGSAI ALVLSVVSAV VVGDGVSKKG GMALSAG