| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0047 |
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| Symbol | gidB |
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| ID | 5745583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 53038 |
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| End bp | 53697 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641295110 |
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| Product | 16S rRNA methyltransferase GidB |
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| Protein accession | YP_001561079 |
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| Protein GI | 160895497 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
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| TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCAGG AACTGCGCGC TCCGCTCGAA GCCGGCCTGC AGGCGCTGGG GCTGGACCTC
ACCCCCGCCC AGATCGATAC GCTGATGGAA TTCCAGGCCC TGCTGGGCAA GTGGAACAAG
GTCTACAACC TCACGGCCGT GCGTGATCCG CAGGAGATGC TGACCCATCA CCTGCTCGAC
AGCCTGGCTG CCGTGCCGGC GCTGCAGCGC CATCTGGCAC AGATGCCTGC GCGCGAAGGC
CGCACCGCCA TGCTGGACGT GGGCTCGGGC GGCGGCCTGC CTGGCGTGGT GTTTGCCATC
TGCTGCCCGC AGATCGACGT GCACTGCGTG GACACGGTGG GCAAGAAGGC CGCCTTCATC
CAGCAGGCGG CGGCCACGCT GCGCCTGCCC AACCTGCGCG GCATCCACAG CCGCGTGGAG
CAGCTGACCA CGCGCTATCC GCTGATCAGC TGCCGTGCCT TTGCCTCGCT GGCGGACTTC
ACCAGCTGGT CGCGCCAGGC GCTGGAGGAG GGCGGCACCT GGCTGGCCAT GAAGGGCAAG
CACCCCGACG ATGAAATCGC CGCGCTGCCC GCCGACGTGC AGGTGTTTCA CGTGGAACCA
TTGAAGGTGC CGGGCCTGGA TGCCGAGCGC TGCATCCTCT GGCTGCGCGT TTGCGCCTGA
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| Protein sequence | MSQELRAPLE AGLQALGLDL TPAQIDTLME FQALLGKWNK VYNLTAVRDP QEMLTHHLLD
SLAAVPALQR HLAQMPAREG RTAMLDVGSG GGLPGVVFAI CCPQIDVHCV DTVGKKAAFI
QQAAATLRLP NLRGIHSRVE QLTTRYPLIS CRAFASLADF TSWSRQALEE GGTWLAMKGK
HPDDEIAALP ADVQVFHVEP LKVPGLDAER CILWLRVCA
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