Gene Daci_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0039 
Symbol 
ID5745575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp45716 
End bp46690 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content71% 
IMG OID641295102 
Producthypothetical protein 
Protein accessionYP_001561071 
Protein GI160895489 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA TCACCCGACG CACGGCCCTG CTTGCAGGCG CCGCCTCACT CTCCCTTTCC 
ACGGCCCGGG CCCAGGGCGG TTTTCCCAGC CGGCCCATTC AATTGATCCA CGGCTTTGGC
GCGGGCGGCA ATGCCGACGT GGTGGCCCGG CTCGTGGCCC AGAAGCTGCA GGAATCGCTC
AGACAGCCCG TGGTGGTGGA GATCAAGAGC GGCGCGGGCG GCTCCATTGC CAGCAACTTC
GTGGCCAAGG CGGTGCCGGA CGGCTACAGC CTGGTCATGC TCACGGGTGC GCACACCGTG
TCGGCCGCGC TGCGCAAATC GCTGCCCTAC GACGCGGTCA AGGACTTCGC CTTTGTCTCC
ACCGTCTCGT CCTTTCCCTT CGTGGTGGCC GTGCGTGCCG AGCATCCCGC CAGGACCCTG
GCCGATCTGC TGGCCATGGC CCGCAAGGAG CCGGGACGCA TCACCTTCAC CTCGGTGGGC
GTGGGCTCCA CCCAGCACAT GGCCGGTGAG CTGCTGGGCT CCACGGCAAA GGTACAGCTG
CTGCACGTGC CCTACCGGGG CGGCGGCGCA CCCGTGCAGG CCGTGATAGC GGGCGATGTG
GACGTGCTCA GCGACACGCT GACCGTGGCC ATGCCGCACA TCAAGTCGGG CCGGCTGCGC
GCCCTGGCCG TCACCAGCGC CCAGGCCTGG CCCACCCTGC CCGAGGTGCC GCCGGCCTCG
GCCGTGCTGC CCGGCTTCGA GGTGCACTCC TGGCTGGGCC TGGCCGCGCC CGCAGGCACG
CCCGCCGACG TGGTGCAAAG GCTGGCCGCC GAAGCCCACA AGGCCCTGAA GGAGCCCGAC
CTGCTCCAGG CCCTGGCCAG CGCCGGCAGC GCGGCCACGC CCTGCAGCCC CGAGGAGATG
CGAGCCATGG TGGGCGCCGA GATCGCGCGC TGGCGCGGCG TCATCCAGCA GGTCGGCATC
CCGCTGCAGG CCTGA
 
Protein sequence
MTAITRRTAL LAGAASLSLS TARAQGGFPS RPIQLIHGFG AGGNADVVAR LVAQKLQESL 
RQPVVVEIKS GAGGSIASNF VAKAVPDGYS LVMLTGAHTV SAALRKSLPY DAVKDFAFVS
TVSSFPFVVA VRAEHPARTL ADLLAMARKE PGRITFTSVG VGSTQHMAGE LLGSTAKVQL
LHVPYRGGGA PVQAVIAGDV DVLSDTLTVA MPHIKSGRLR ALAVTSAQAW PTLPEVPPAS
AVLPGFEVHS WLGLAAPAGT PADVVQRLAA EAHKALKEPD LLQALASAGS AATPCSPEEM
RAMVGAEIAR WRGVIQQVGI PLQA