Gene Daci_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0012 
Symbol 
ID5745548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp13737 
End bp14708 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content69% 
IMG OID641295075 
Producthypothetical protein 
Protein accessionYP_001561044 
Protein GI160895462 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCA AGACGGCAAG ACGCCAAACC CTTCTCACCG CCCTGCTTCT GGCCGCCGGC 
GCGGCCGCAT CGCAGGACTA TCCTGCGCGC CCCATCAAGC TGGTGATTCC CTATGCGGCA
GGCGGCCCCA CCGACACCTT CGGCCGCGCC ATGGCCGATG TCTGGAGCCA GAAGCTGGGC
ACGCCCGTGG TGATCGAGAA CCGCACGGGT GCCGGCACCC TGGTGGGCAC GGAGGCGGTT
GCCAAGGCAG CCCCTGACGG CTACACCCTG CTGCTGACCA CGGTGGCGCA TGCCGTCAAT
CCCTACATCC ACGACAAGCT GGGCTACCGC ACGGAGGAAG ACTTCGCGCC TGTGGGACTG
CTCGCCAGGG CGCCGCTGGT GCTGGTGGTC GACAAGCGGC TGCCCGTGCA AAGCCTGCCG
GATTTCCTGG CCTATCTGCG GGCGCGGCCC GGCCAGGTCA GCTATGCATC GGCGGGCGTG
GGCAGCGCTC CGCACCTGGG TGCGGAGCTG CTGAACCTGA TGGCGGGCAC CCGGGCCCAG
CATGTGCCCT ACCGGGGCAG TGCGCCAGCC ATACAGGACC TCATCGGCGG GCACCTGGCC
TTCATGCTGG ACAGCGCTCC CACGGGCCTG GCCCAGGTCA AGGCGGGCAC GGTGCGCCTG
CTGGCCACCA CCATGGCCCA GCGCCTGCCG CAGACACCCG ACACGCCTGC CATTGCCGAG
CAGGTGCCCG GCTACGAGGC CTATACCTGG AACGCCGTGT TCGCCCCCGC AGGCACGCCG
CCAGCGCTGA TTGCCCGCCT GCAGTCCAGC CTGCAGGCCA CGGTGGACGA TGCCGGGCTG
CAGAAAAAGG CCTACGACAT GGGCCTGGTG CTGGAAAAGC AGCCCCGCCC CCAGGCGCTG
GCCGCCTTCC TCAAGCAGGA GCTGGACAAA TGGGGCAAGG TCGCCCGCGC CGCCCACATG
AGCGCGAACT GA
 
Protein sequence
MDFKTARRQT LLTALLLAAG AAASQDYPAR PIKLVIPYAA GGPTDTFGRA MADVWSQKLG 
TPVVIENRTG AGTLVGTEAV AKAAPDGYTL LLTTVAHAVN PYIHDKLGYR TEEDFAPVGL
LARAPLVLVV DKRLPVQSLP DFLAYLRARP GQVSYASAGV GSAPHLGAEL LNLMAGTRAQ
HVPYRGSAPA IQDLIGGHLA FMLDSAPTGL AQVKAGTVRL LATTMAQRLP QTPDTPAIAE
QVPGYEAYTW NAVFAPAGTP PALIARLQSS LQATVDDAGL QKKAYDMGLV LEKQPRPQAL
AAFLKQELDK WGKVARAAHM SAN