Gene Daci_0008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0008 
Symbol 
ID5745544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp9434 
End bp10345 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content66% 
IMG OID641295071 
Productallophanate hydrolase subunit 1 
Protein accessionYP_001561040 
Protein GI160895458 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2049] Allophanate hydrolase subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CCAGCACCCT CCCCACCCAG GCCCGCTACA GCTTCGGCGG CGACGAGCAC 
CTGTTCGTCG AGATCAGCGA AGAGATGTCG CTGCCCGCGT TCTTCAAGGG CATGGCCATC
TGCAATGAGC TGCGCCGCCG CGCACAGGCG GGCGAGATCA CGGGCGTGAC CGAGATCTGT
CCGGCCAACG CCGCCTACCT CGTGCGCTTC GATCCCGATG CGATCGCGCC CGACGCACTG
CTCGCCACGC TCAAAGACAT CGAAGCGGGC CTGGGCGATG CCGACCTGCA GATGCAGACG
CGCATCGTCG AGATTCCCGT GCTCTACAAC GACCCGTGGA CGCACGAGAC GCTGATGCGC
TTTCGCGAGC GGCACCAGGA CCCGTCGGGC ACCGACATCG AGTACGCGGC GCGCATCAAC
GGCCACGTCT CGGTCGAGGC CTTCATCGAG GCGCACTCGT CGGCGCCCTG GTTCGTGTCG
ATGGTCGGCT TCGTGGCCGG CCTGCCCTTT CTGTTCCAGA TGGTCGAGCG CCAGCGCCAG
ATCCAGGTGC CCAAATACCT GAGCCCGCGC ACCGACACGC CCAGGCTCAC GCTGGGCCAC
GGCGGTTGCT TCAGCTGCAT CTACTCGGTG CGTGGTGCGG GCGGCTACCA GATGTTCGGT
GTCACGCCCG CGCCCATCTT CGACCCGGCG CAACGGCTGT CCTACCTGAA GGAGCTGATG
GTGTTCTTCC AGCCCGGCGA CATCGTCAAG TACAAGCCCA TTGACCGCGC CGAGTACGAC
CGCCAGATCG CGCAGGTCGA GGCCGGCACC TACGCGCTGC GCATCGCGCC AGTGTCGTTC
TCGCTCAACG ATTTCCTGGC CGACCCGGGC GGCTACAACC AACAGCTCCT GAAAGTGCTC
CATGGCGATT GA
 
Protein sequence
MTAASTLPTQ ARYSFGGDEH LFVEISEEMS LPAFFKGMAI CNELRRRAQA GEITGVTEIC 
PANAAYLVRF DPDAIAPDAL LATLKDIEAG LGDADLQMQT RIVEIPVLYN DPWTHETLMR
FRERHQDPSG TDIEYAARIN GHVSVEAFIE AHSSAPWFVS MVGFVAGLPF LFQMVERQRQ
IQVPKYLSPR TDTPRLTLGH GGCFSCIYSV RGAGGYQMFG VTPAPIFDPA QRLSYLKELM
VFFQPGDIVK YKPIDRAEYD RQIAQVEAGT YALRIAPVSF SLNDFLADPG GYNQQLLKVL
HGD