| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_0002 |
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| Symbol | |
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| ID | 5745538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1544 |
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| End bp | 2662 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641295065 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_001561034 |
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| Protein GI | 160895452 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00413752 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCC TGAAAGCCAC ACAAGACAAA GTTCTCGCGG TCCTGCAATC GGTGTCCGGC
ATCGTCGAAC GCCGCCACAC GTTGCCCATC CTGGCCAACG TGCTGATCAA GAAGACCGGC
AACGCATTGC AGCTGACCAC CAGCGACCTG GAAATCCAGA TCCGCACCAC CGCCGAGCTC
GGCGGCGACA CCGGCGACTT CACCACCACC GTGGGCGCGC GCAAGCTGAT CGACATCCTC
AAGACCATGC CCGGCGACCA GACCGTGAGC CTGGAGACCC AGCAGGCCAA GATGGTGCTC
AAGGGCGGCA AGAGCCGCTT CACGCTGCAG ACCCTGCCGG CCGAGGACTT CCCGCTGGTT
CAGGAGGCTG CGGCCTTCGG CCCTTCGTTC AGCGTGCCGC AGAAGGTGCT CAAGGACCTG
CTGGGCCAGG TCTCCTTCGC CATGGCCGTG CAGGACATCC GCTACTACCT CAACGGCATC
CTGTTCGTGG CCGAGGGCAA GCAGCTGTCC CTGGTGGCCA CCGACGGCCA CCGCCTGGCG
TTCGCAAGCA GCCAGCTGGA CGTGGAAGTG CCCAAGCAGG AAGTGATCCT GCCGCGCAAG
ACCGTGCTGG AGCTGCAGCG CCTGCTGTCG GATGCCGGTG GCGAGAACCA GCCCCACATC
GAGATGCAGT TCGCCAACAA CCAGGCCAAG TTCACCTTCG GCGGCATGGA GTTCGTGACC
AAGCTGGTCG AGGGCAAGTT CCCCGACTAC AACCGTGTCA TCCCGCGCAA CCATACCAAC
AGCGTGACCC TGGGCCGCGC CCCGCTGCTG GCAAGCCTGC AGCGCACGGC CATCATGACC
AGCGACAAGT TCAAGGGCGT GCGCCTGACG GTGGAGCCCG GCACCTTGCG CGTGGCGTCC
AACAACGCCG AGCAGGAAGA GGCCATGGAC GAGCTGGACA TCGACTACGG TGGCGACACC
ATCGAGATCG GCTTCAACGT CACCTACCTG ATCGACGCCC TGTCCAACAT GAGCCAGGAC
ATGATCAGGA TCGACCTGCA GGACGGCAAC AGCTCGGCCC TGCTGACCAT CCCCGAGAAC
GACAGCTTCA AGTACGTCGT GATGCCCATG CGCATCTGA
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| Protein sequence | MIVLKATQDK VLAVLQSVSG IVERRHTLPI LANVLIKKTG NALQLTTSDL EIQIRTTAEL
GGDTGDFTTT VGARKLIDIL KTMPGDQTVS LETQQAKMVL KGGKSRFTLQ TLPAEDFPLV
QEAAAFGPSF SVPQKVLKDL LGQVSFAMAV QDIRYYLNGI LFVAEGKQLS LVATDGHRLA
FASSQLDVEV PKQEVILPRK TVLELQRLLS DAGGENQPHI EMQFANNQAK FTFGGMEFVT
KLVEGKFPDY NRVIPRNHTN SVTLGRAPLL ASLQRTAIMT SDKFKGVRLT VEPGTLRVAS
NNAEQEEAMD ELDIDYGGDT IEIGFNVTYL IDALSNMSQD MIRIDLQDGN SSALLTIPEN
DSFKYVVMPM RI
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