Gene Daci_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_0001 
SymboldnaA 
ID5751690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp16 
End bp1422 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content63% 
IMG OID641295064 
Productchromosomal replication initiation protein 
Protein accessionYP_001561033 
Protein GI160895451 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0688864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG AACCTACGAA CGATGCAGGC CAGGGCCTGT GGCAAGTCTG CGTTGAGCAA 
CTGGGGCAGG AAATGCCCGA ACAGCAGTTC AACACCTGGA TCAAGCCCCT GACCGCGCAC
GTCGCCGAAG ACTTCTCCAA AGTCACCGTC TACGTGGCCA ACCGCTTCAA GCTCGACTGG
ATCCGCGCCC AATATGCAGG CCGCATCTCG GCCATGCTGG AGTCGCTCTA TGGCCAGCCG
GTGACGCTTG AGTTGGCACT TGCTCAGCGG GAAAGCGTTG TGCGGACTTA CGTCCGCCCC
TCCTCCAGCG AGCGCTCGGC CCCACCGGAA ACCATCGTCA CCTCGGTGCC CACGGTCACC
AGCGAAGACG CGGCAGCGCC CGTCTTTCGC ACGCGCCTGA ACGCCGCGCT GACCTTCGAG
ACCCTGGTGG AAGGTACGGC CAACCGCATG GCACGCTCGG CCGCCATGCA TGTGGCGGGC
TCGCCCGGAC ACCTGTACAA CCCGCTGTTC ATCTACGGCG GCGTGGGCCT GGGCAAGACC
CACCTGGTGC ATGCCGTGGG CAACAAGCTG CTGGCCGACA AGCCCGACGC CAAAGTTCTC
TACATCCATG CCGAGCAGTT CGTCTCGGAT GTGGTCAAGG CCTACCAGCG CCGCACCTTT
GACGAATTCA AGGAGCGTTA CCACTCGCTG GATCTGCTGC TGATCGACGA CGTGCAGTTC
TTCGCCAACA AGGACCGCAC GCAGGAGGAG TTCTTCAACG CCTTCGAGGC GCTGCTGGCC
AAGAAGAGCC ACATCGTGAT GACCTCGGAC ACCTATCCCA AGGGTCTGGC GAACATCCAC
GAGCGGCTGG TATCGCGCTT CGACTCCGGG CTGACGGTGG CCATCGAGCC GCCCGAGCTG
GAGATGCGCG TGGCCATCCT GATCAACAAG GCCCGCGCCG AGAACGCCGA GATGCCCGAG
GAAGTCGCCT TCTTCGTGGC CAAGAACGTG CGCTCCAACG TGCGCGAGCT CGAAGGCGCG
CTGCGCAAGA TCCTGGCCTA TTCGCGCTTC AACCAGAAGG AAGTCTCCAT CCAGCTGGCC
CGCGAGGCCC TGCGTGATCT GCTGTCCATC CAGAACCGCC AGATCAGTGT GGAGAACATC
CAGAAGACGG TGGCCGACTA CTACAAGATC AAGGTGGCCG ACATGTACAG CAAGAAGCGC
CCGGCCAGCA TCGCCCGGCC GCGCCAGATT GCCATGTACC TGGCCAAGGA ATTGACCCAG
AAGAGCCTGC CCGAGATCGG CGAGCTGTTC GGCGGGCGCG ACCACACCAC CGTGCTGCAC
GCGGTGCGCA AGATCGCCGG CGAACGCCAG CAACTGACCG AGCTGAACCA GCAGCTGCAC
GTGCTGGAGC AAACTCTCAA AGGTTGA
 
Protein sequence
MTEEPTNDAG QGLWQVCVEQ LGQEMPEQQF NTWIKPLTAH VAEDFSKVTV YVANRFKLDW 
IRAQYAGRIS AMLESLYGQP VTLELALAQR ESVVRTYVRP SSSERSAPPE TIVTSVPTVT
SEDAAAPVFR TRLNAALTFE TLVEGTANRM ARSAAMHVAG SPGHLYNPLF IYGGVGLGKT
HLVHAVGNKL LADKPDAKVL YIHAEQFVSD VVKAYQRRTF DEFKERYHSL DLLLIDDVQF
FANKDRTQEE FFNAFEALLA KKSHIVMTSD TYPKGLANIH ERLVSRFDSG LTVAIEPPEL
EMRVAILINK ARAENAEMPE EVAFFVAKNV RSNVRELEGA LRKILAYSRF NQKEVSIQLA
REALRDLLSI QNRQISVENI QKTVADYYKI KVADMYSKKR PASIARPRQI AMYLAKELTQ
KSLPEIGELF GGRDHTTVLH AVRKIAGERQ QLTELNQQLH VLEQTLKG