| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3936 |
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| Symbol | |
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| ID | 5744687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4836601 |
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| End bp | 4837242 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 641295053 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001561022 |
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| Protein GI | 160882054 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00507176 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCACAA TTCGTGTAGT AATTGCAGAT GATCATAAGA TGGTCAGAGA GGGTTTGAAA
CAACTTTTGG AACTAGACGG TGATATTCAA GTAGTTGGAG AAGCAAGTGA TGGTGAACAG
TGTATACAAA AAGTGGTGGA TACAAACCCT GATGTGCTAC TCCTTGATAT CAATATGCCA
ACAATGAATG GATTACAAAC TCTACAAGAG CTAAGAAGAA ATAATAACAA ACAAAAGGTT
CTGATGCTAA CAATCCATAA CGAGATAGAA TATTTATTGC GTGCTGTTGA TATTGGAGTT
AATGGGTATG TTTTAAAAGA TTCAGAGTCT TCTGTATTAA AGAAAGCAAT TTATACAATT
TATCAGGGAG AAACCTATAT TGAGCCATCA TTAACTCCTG AATTAAAAGA GCGTATGCAA
AGTCCAAGTT CTTCTAATAC AGAGATTTTA ACACGCAGAG AAATTGATGT ATTAAAATTA
TTAGCAGAAG GTTTATTTAA TAAGGAAATT GCTTATCGCT TAAGTATTAG TGAGAAGACA
GTAAAGAATC ATGTTTCTAA TATATTTAAA AAGATTAGCG TTTCTGACCG TACACAAGCG
GCTGTTTACG CAATCAAAAA TAATTTTGTA AATATGTTTT AA
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| Protein sequence | MGTIRVVIAD DHKMVREGLK QLLELDGDIQ VVGEASDGEQ CIQKVVDTNP DVLLLDINMP
TMNGLQTLQE LRRNNNKQKV LMLTIHNEIE YLLRAVDIGV NGYVLKDSES SVLKKAIYTI
YQGETYIEPS LTPELKERMQ SPSSSNTEIL TRREIDVLKL LAEGLFNKEI AYRLSISEKT
VKNHVSNIFK KISVSDRTQA AVYAIKNNFV NMF
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