| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3908 |
|---|
| Symbol | |
|---|
| ID | 5742306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4805102 |
|---|
| End bp | 4805692 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641295022 |
|---|
| Product | spore maturation protein |
|---|
| Protein accession | YP_001560994 |
|---|
| Protein GI | 160882026 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2715] Uncharacterized membrane protein, required for spore maturation in B.subtilis. |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATT ATCTATGGGC ATTCATGATT ATTATTGGAA TTGTGTACGG TGCATTCACA
GGGAAGATGT CTGCTATCAG TACAACAACC ATATCTTCCG CAAAGGAGGC TGTAACCCTA
TGTATTGCAA TGCTTGGGGT TATGTCTCTA TGGATGGGCC TTATGGAGGT TGCTAGGGGT
ATTGGGCTTA TGGATCAATT AACAAGGAGA CTTCGGCCAT TATTAAAAGT ATTATTTCCA
GACATACCGA AGGATCATAT TGTAAATGAG TACATTGCAT CTAATATGAT TGCCAATATC
TTGGGACTTG GATGGGCTGC CACACCAGTA GGTTTAAAGG CAATGAAAGA ATTAGCTACT
TTAAATAAAA ATTCAAAGCT TGCAAGCTGT GATATGTGTA CGTTTCTAAT TATCAATATT
TCTTCTCTTC AGCTGATTCC AGTTAATATT ATAGCATACC GGAGTCAGTA TGGTTCAATG
AATCCTTCAG ATATCTTAGG TGTTAGTATA CTTGTTACTT TCTGTTCTAC CCTTGTTGGT
GTTGCTTTTT CTATTATAGC AAGAAAGCTA TCTAAGAAAC CAAAGTATTA A
|
|---|
| Protein sequence | MINYLWAFMI IIGIVYGAFT GKMSAISTTT ISSAKEAVTL CIAMLGVMSL WMGLMEVARG
IGLMDQLTRR LRPLLKVLFP DIPKDHIVNE YIASNMIANI LGLGWAATPV GLKAMKELAT
LNKNSKLASC DMCTFLIINI SSLQLIPVNI IAYRSQYGSM NPSDILGVSI LVTFCSTLVG
VAFSIIARKL SKKPKY
|
|---|
| |