| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3887 |
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| Symbol | |
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| ID | 5742284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4777459 |
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| End bp | 4778217 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641295000 |
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| Product | two component AraC family transcriptional regulator |
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| Protein accession | YP_001560973 |
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| Protein GI | 160882005 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAT TATTAATTGC AGATGATGAA AAGATAATAC GCGAAGGCAT AGCCAAACTC
ATTCAAGCCT CTAGTTTACC TGTTACTATC GTTGGGCAAG CCGCAAATGG ACGACAAGCG
CTCGAGATGA TGCAGTCAAC GCGTCCAGAC CTTGTCATCA TTGATATCAC GATGCCTGCC
ATTACCGGGC TTGATGTGAT TGAACAATCC AAAGATTTTC TACCGTCTTC GAAATTCATT
ATCGTCTCTG GGCATGACAG CTTTCCATTT GCTCAAAAAG CAATCGAATT GGGTGCCTTT
CATTATCTTT TAAAACCTAT CAAGCGAAGC CAGCTGTTAT CCGTGGTGGA ACATGCCTTA
GAAACACTTG AAAAAAAAGA AGAAGTTATA GTTTCAACAG ATACCGATAT AACTTCTGTG
TCAGATGCAA CGAACGGTAC GGTATGTGAA AAGGTATCCG CTTATATCAA CGATCATCAC
TGCGATAGTA ATATGAGTCT TAATTTTGTT GCTGATAAAT TTCATATCAG CCAATCTTAT
CTGACCCGAA TAATTAAGAA AAGTACCAAT TTAAGTTTTA CAGAATATCT AAATAAACTA
CGGATTCAAC AAGCAATCTT TCTTTTATCT TCCAGAGAAA ATCTATTAAT CGCCCAAATT
GCAGAACTTG TTGGTTATTC CAGTCAACAT TATTTTTCTC GGGTATTCAA AAATCATACC
GGTGTTTCTC CCGTAGAATA TCGTAACATG CGTGGATAA
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| Protein sequence | MRKLLIADDE KIIREGIAKL IQASSLPVTI VGQAANGRQA LEMMQSTRPD LVIIDITMPA
ITGLDVIEQS KDFLPSSKFI IVSGHDSFPF AQKAIELGAF HYLLKPIKRS QLLSVVEHAL
ETLEKKEEVI VSTDTDITSV SDATNGTVCE KVSAYINDHH CDSNMSLNFV ADKFHISQSY
LTRIIKKSTN LSFTEYLNKL RIQQAIFLLS SRENLLIAQI AELVGYSSQH YFSRVFKNHT
GVSPVEYRNM RG
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