Gene Cphy_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3881 
Symbol 
ID5742278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4769222 
End bp4769851 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content36% 
IMG OID641294994 
Productflavin reductase domain-containing protein 
Protein accessionYP_001560967 
Protein GI160881999 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAAG AAATTTTTAA ACCTGGTAAT ATGTTATATC CATTACCAGT CGTAATGGTC 
AGTTGTGCTG ACGAATTTGG GAATAATAAT ATCATAACGG TAGCTTGGTG TGGAACGATT
TGTACTAATC CACCTATGGT TTCGGTTTCT ATAAGACCGG AGCGACATTC TTATTCAATA
ATTGAAAAAA CAAAAGAATT TGTCATTAAT TTAACCACAG AAGAACTTAC CAAAGCAACT
GATTTTTGCG GCGTTCGTTC AGGTAGAGAC GTGGATAAGT TTAAGGAGAT GAATTTAACT
CCGAAAAAAG GAGAGAAGGT GAAAGCGCCA ATTATAGAGG AATCCCCTGT TAATATCGAG
TGCCGATTAA AGGAGATTAT AAAACTTGGT TCTCACGACA TGTTTATCGC AGAGGTAGTA
GGTGTACAAG TCGACAAGAA AGCTATGAAT GAGACAGGAA AATTCGAGTT AAATAAGACA
AGGCCGGTAG TTTATTCTCA TGGAGAGTAT TATGGTCTTG GATCTTTACT TGGAAACTTT
GGTTATTCTG TAAGAAAACA AAAGATTCAA AAGGTTGATA AAAAACAAAG TAAGAAACCG
CGGGGTAAGA TTAACGATGA AAAAAGATAA
 
Protein sequence
MEKEIFKPGN MLYPLPVVMV SCADEFGNNN IITVAWCGTI CTNPPMVSVS IRPERHSYSI 
IEKTKEFVIN LTTEELTKAT DFCGVRSGRD VDKFKEMNLT PKKGEKVKAP IIEESPVNIE
CRLKEIIKLG SHDMFIAEVV GVQVDKKAMN ETGKFELNKT RPVVYSHGEY YGLGSLLGNF
GYSVRKQKIQ KVDKKQSKKP RGKINDEKR