Gene Cphy_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3879 
Symbol 
ID5742276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4767143 
End bp4768441 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content39% 
IMG OID641294992 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_001560965 
Protein GI160881997 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAGT ATATTATAAA GGGAGGCAAG GCTTTAGCCG GTGAAGTTAC CATCGGTGGG 
GCAAAGAATG CAGCATTAGG TATTTTGGCG GCTGCAGTAA TGACGGACGA GCAGGTTACA
ATTGAAAATT TGCCGGATGT TAGTGACATT TGTATTCAAC TTCAAGCAAT AGAAGCGATT
GGCGCTAAAG TAGAGAGAAT AGACAGACAT ACTGTTAAGA TAAATGGTGG TACTATAAAT
TCTAGAAGTA TCGACGATGA TTTTGTTCGC CGAATTCGTG CATCTTATTA CCTTTTAGGT
GCATTACTTG GAAAATATAA ATATGCAGAA GTTGCACTTC CAGGTGGATG TAACATTGGA
AGTAGACCGA TAGATCAACA TATTAAAGGA TTTGAAGCTC TTGGAGCAGA AGTAAAGATT
CAGCATGGTA TGATAACAGC ATCAGCAAAA AAATTAGTAG GTACACATCT TTATTTTGAC
TGTAATACTG TTGGTGGTAC AATAAATGTT ATGCTTGCAG CAGCGTTGGC AGAGGGTCAA
ACAATAATAG AGAATGCTGC GAAAGAGCCA CATGTCGTTG ATGTTGCTAA CTTTTTAAAT
AGCATGGGTG CTAATGTAAA AGGAGCAGGA ACTGACGTAA TTCGTATTAA AGGTGTAAAT
AAATTACATG GCAGTACGTA TTCTATCATT CCAGATCAGA TTGAAGCAGG AACCTTTATG
TTAGCAGCGG TTGCAACAAA AGGTGATGTA ACAATTAAGA ATGTTATTCC AAAACACTTA
GAAGCAATCA CTGCAAAAAT TGTTGAAATT GGTGCAGAAG TGGAAGAATT CGATGATGCA
ATTCGTGTCG TAGCAAATAA GAGATTAGGT CATACTCAGG TTAAAACCTT ACCATACCCA
GGATTTCCAA CAGACATGCA ACCACAGATA GCAACAGTTT TAGCTATGTC AAGTGGTACA
AGCATCGTGA CAGAAAGTAT TTACGAAAAT CGTTTTAAGT ATGTCGATGA ACTTGCAAGA
ATGGGTGCTT CCATTAAGGT AGAAGGAAAC ACTGCTATTA TTGATGGAGT AGCTGAGTTA
ACTGGAGCAA AAGTATGCTC CCCTGATTTA CGCGCTGGTG CTGCATTAGT TATTGCAGGA
TTAGCAGCGG AAGGTGTAAC TGTTGTTGAG AATATTGAAT TAGTAGAACG TGGTTACGAG
AACTTTGAAG ATAAGATGAA AGAACTTGGA GCTTCCATGG AAAAGGTAGA TGCGGAAGAC
GAAAAGTCCA ATCGAAAAGC TAGATTAAAG ATAGGCTAA
 
Protein sequence
MEQYIIKGGK ALAGEVTIGG AKNAALGILA AAVMTDEQVT IENLPDVSDI CIQLQAIEAI 
GAKVERIDRH TVKINGGTIN SRSIDDDFVR RIRASYYLLG ALLGKYKYAE VALPGGCNIG
SRPIDQHIKG FEALGAEVKI QHGMITASAK KLVGTHLYFD CNTVGGTINV MLAAALAEGQ
TIIENAAKEP HVVDVANFLN SMGANVKGAG TDVIRIKGVN KLHGSTYSII PDQIEAGTFM
LAAVATKGDV TIKNVIPKHL EAITAKIVEI GAEVEEFDDA IRVVANKRLG HTQVKTLPYP
GFPTDMQPQI ATVLAMSSGT SIVTESIYEN RFKYVDELAR MGASIKVEGN TAIIDGVAEL
TGAKVCSPDL RAGAALVIAG LAAEGVTVVE NIELVERGYE NFEDKMKELG ASMEKVDAED
EKSNRKARLK IG