Gene Cphy_3864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3864 
Symbol 
ID5744817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4745367 
End bp4746149 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content42% 
IMG OID641294977 
Producthypothetical protein 
Protein accessionYP_001560950 
Protein GI160881982 
COG category[R] General function prediction only 
COG ID[COG3694] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAT ATATGCATAT CTATAGGGAG TGCATCAAAG TGTCTTTTAC CACAGCCTCT 
ACCTACCGTT TGAATTTTTT CCTGAATTCA GTAATTATGC TACTAGGAGA TATATTGTTC
CCACTGGTTA CCCTCTTAAT TTATGGGTCG GGAGCTGGAT TTGAAGGTTG GACTGTATAT
GAAGTACTGT TAATCCAATC CGTATTTACG ATGTCCATGG CAATCGCTGA TATGAGCTTT
CATGGAATTA TGTGGGCAAC CATGGGAGCT GTTCGTGAGG GAAATTTAGA GATGGTACTG
CTAATGCCGG TGGATACAAT GTTTCTTCTA ATGGCACGCA GCTTTTCCAT TGATGCAATT
GGCTCATTCC TCGGAGGAGC AACGATTTTT ATAATTGCAT TAACGCATTT GGAAGCACCA
TCCCTGATTA TGTGGCTACA GTTTGGCTCT ATGTTTCTGA TAGGACTTAT GGTTATGATG
GGGATTGCAC TTATGATGGC TGCAACTTCT TTCAAATGGG TTGGAAATTC ACGCATTCCT
GAGATATTTG ACAGCCTGCG AAGCTTCGGA AAGTATCCGC AGAGTATTTT CCCAAAGGCA
ATTCTGATCA TATCTTCTTT TTTGATACCG GTGGCAATGA TTGGCTTCTT TCCGGCAGCA
GCACTGCTGG GAAGAGGGAA TTACATCATG TTTATCGCTA TTCTTCCATG TATTGTATTT
TTGATTCTAG GAATTGCTTT ATATCGATTT ATGGTACGCA TGTATCAGGG CGTCGGAGGC
TGA
 
Protein sequence
MKRYMHIYRE CIKVSFTTAS TYRLNFFLNS VIMLLGDILF PLVTLLIYGS GAGFEGWTVY 
EVLLIQSVFT MSMAIADMSF HGIMWATMGA VREGNLEMVL LMPVDTMFLL MARSFSIDAI
GSFLGGATIF IIALTHLEAP SLIMWLQFGS MFLIGLMVMM GIALMMAATS FKWVGNSRIP
EIFDSLRSFG KYPQSIFPKA ILIISSFLIP VAMIGFFPAA ALLGRGNYIM FIAILPCIVF
LILGIALYRF MVRMYQGVGG