| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3858 |
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| Symbol | |
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| ID | 5744810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4731867 |
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| End bp | 4733216 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294970 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001560944 |
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| Protein GI | 160881976 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000022263 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAT TACTTGCGTT ACTGTTAACT CTTACAATGG TAGTATCTAT GGCTGCCTGC
ACTAAGAAAG AGGATCCAGC TACTAATACC CCTGGTAGTA GTACAGATAG CCCTAAAGCT
ACTGCTACAA CGGCTCCTAC GGCTGCACCT AAGAAAGTTA CATTAAATGT TACTACTACA
TATGCCGGAA ACGATGGCAA TGCTCAGAAT TACCAAGACG CTGTCGCTAA TTGGGAAAAA
TCAACTGGAA ACAAAGTGAA TGATTCCTCA TCAACTTCTG ATGAAACTTT TAAAGCTAGA
GTTTTAGCAG ACTTCGAAAC AGGATCTGAA CCAGACGTAT TATTCTTCTT TAACGGTGTG
GATTCCAATG CTTTCGTTCA AGCAGGCAAA GTAGTATCTA TCGATGAAAT TCGTCAATCT
TACCCTGACT ATGCATCTAA TATGAAAGAT GGCATGTTAG GCGCTTCTCC TGTTGATGGA
AAGAACTATT CCGTTCCTGT AAATGGTTAC TGGGAAGGTA TGTTTGTAAA CAAAGAAGTA
TGTAAGGCTG CTGGTGTTCA GATTCCAGAT GCTAACACTA CATGGGATCA GTTCCTTGAG
ACTTGTCAGA AGATTAAAGA TGCAGGCTTT GCTCCTATCG CTGTTTCTTT AGCAACTGTA
CCTCACTACT GGTTTGAGTT CTCTATTTAC AATTTCTTAT CACCATCAAC ACATAATGTT
CTTCCAAAGA ACACTACTGA TACTCAGGGA CAGGCATGGG TGAACGGTAT TAACGATATT
AAGATGCTTT ATGAAAAAGG TTATTTCCCA GAAAATACTT TAACAGGTAC TGACGATGAA
ACTGTTCAAT TATTTATTGA TAACAAAGCA GCATTCTTAA TCGATGGTTC TTGGAAAGTT
GGTGGAATCG AAGGTTTAAC AACCGATATT GATAATTTTA CTGTTACTTA TGTTCCAGGA
AAGGGCGACA GAAAGACTAC AGATATCATC GGTGGATTAT CTAGCGGATA TTTTATCTCA
AAGAAAGCTT GGGAAGATCC AGATAAGCGT GCTGCTGCTG TTGATTTTAT TACTTCCATG
ACAAGTGATG AGTTAGTTTC TAAATTCGCA CAAGTATCGG CTACAGCATT AAAGAATGGT
CCTACAGTAG ATGAATCTAA ATTATCATCT CTAGCTAAAG ATGGCCTTAA GTATGTAAAA
GGCGCTACTG GAATGGCTAG CGCTGTAGAA GATCAGGTTC CAAGAGAGTG TAGAGTTCCT
GTTTTTGATG GAATGCCTAA TTTAGTAACT GGTAAAAACG ATATCGCAGA AGCAATACAA
AGCGTTTTAG ATTTAACAGC TGCTCAATAA
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| Protein sequence | MKKLLALLLT LTMVVSMAAC TKKEDPATNT PGSSTDSPKA TATTAPTAAP KKVTLNVTTT
YAGNDGNAQN YQDAVANWEK STGNKVNDSS STSDETFKAR VLADFETGSE PDVLFFFNGV
DSNAFVQAGK VVSIDEIRQS YPDYASNMKD GMLGASPVDG KNYSVPVNGY WEGMFVNKEV
CKAAGVQIPD ANTTWDQFLE TCQKIKDAGF APIAVSLATV PHYWFEFSIY NFLSPSTHNV
LPKNTTDTQG QAWVNGINDI KMLYEKGYFP ENTLTGTDDE TVQLFIDNKA AFLIDGSWKV
GGIEGLTTDI DNFTVTYVPG KGDRKTTDII GGLSSGYFIS KKAWEDPDKR AAAVDFITSM
TSDELVSKFA QVSATALKNG PTVDESKLSS LAKDGLKYVK GATGMASAVE DQVPRECRVP
VFDGMPNLVT GKNDIAEAIQ SVLDLTAAQ
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