Gene Cphy_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3828 
Symbol 
ID5744780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4686173 
End bp4687300 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content34% 
IMG OID641294940 
ProductGDSL family lipase 
Protein accessionYP_001560914 
Protein GI160881946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT ACAGAGAACA GTTGAAAAAA CGTAATCGGA AAAAGAGAAA TACTCGTGGA 
AAAAGAGTAA TTTATGCAAT AAGTGTGACA GGGATGTTGT CACTTTCCAT ATATTTATGC
TTATCACAAG GGGGGAGCAG TGGGTTTGGA GCAAGGGCTG CAAATTCCCA TAGAGCAGAG
ACTAATATTG AGCTGGGTAA ATATAATGTG GGACTGGGAA ATGATTTGTA CAAACCTAGT
GAGACTGCTT CCCAAATAAA TGAAACAGGT GAGAATAAGA ATCCAATTGA TATGAGCACT
GGGGGGGACA AAAAGGATAA ATCCGATGGA GCTGATTTGG AAGATACCAA GGGGGATATC
GAAGAAAAGA AAGAGGATTT AGCAAATAAC CAAACTGACA CAAATACAGA GGAATCAAAT
AGTAACAATA CGGATGATTC CTCAAAAGAA AATGTAAAAA ATGATAAGGC CACAGAGGAT
GAGAACTCGA AAAAAGATAC TTCGGAAGAT GAAAAATCAG AAGATAAGAA TAGTGAATTT
GAGAATGATT TTTTTAACAA TACCATTTTT ATCGGTGATT CCAGAACCGA AGGTCTTGGA
CAGTTTGGCG GTGTAAAAAA TGCAAAGTTT TATACGTATC GCGGATTGCA AGTAAATACA
GCAATGAAAA AGGACTATAT TACTCTTGAT AATAAACAAA AAGGGAATGT ATTAGATGCA
GCAAGACAAA CTTCATTTTC TAAAGCATAT GTAATGTTTG GACTAAATGA ACTTGGTTGG
GATAGTCTTA AAATCTTTAT AGAAGATTAT CGTGACATAA TTAAAGGATT GAGAATAATA
GAACCAAACT GTGAAATTAT CATACAAGCA AATTACCCTG TGACAAAAAA ATTGAATGAT
GGTGATAAAG TATTTAATAA CACAAATATA AAAAAGTATA ACGATTTGAT TAAAGAGATG
GCTGATGAGG AAGGGGTAGA GTATATTGAT TTATATTCAT TTTTTGCGAA CAAAGACGGC
AATCTACCCG ATGAAGCGAC TTCTGATGGT ATCCATCTAA ATCCAAGCTA CTTTAAGGAT
TGGAAACATT GTCTAATCGA TTTTGGAAGT GGTAATACTG AAATGTAA
 
Protein sequence
MDTYREQLKK RNRKKRNTRG KRVIYAISVT GMLSLSIYLC LSQGGSSGFG ARAANSHRAE 
TNIELGKYNV GLGNDLYKPS ETASQINETG ENKNPIDMST GGDKKDKSDG ADLEDTKGDI
EEKKEDLANN QTDTNTEESN SNNTDDSSKE NVKNDKATED ENSKKDTSED EKSEDKNSEF
ENDFFNNTIF IGDSRTEGLG QFGGVKNAKF YTYRGLQVNT AMKKDYITLD NKQKGNVLDA
ARQTSFSKAY VMFGLNELGW DSLKIFIEDY RDIIKGLRII EPNCEIIIQA NYPVTKKLND
GDKVFNNTNI KKYNDLIKEM ADEEGVEYID LYSFFANKDG NLPDEATSDG IHLNPSYFKD
WKHCLIDFGS GNTEM