| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3819 |
|---|
| Symbol | |
|---|
| ID | 5744771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4673155 |
|---|
| End bp | 4675740 |
|---|
| Gene Length | 2586 bp |
|---|
| Protein Length | 861 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 641294931 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_001560905 |
|---|
| Protein GI | 160881937 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0624258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA GCAAGTTTAC TCAAAAATCG TTAAAGGCAG TTCAGGATTG TGAAAAACTG
GCGTATGAGT ATGGACACCA GCAAATTGAT GAAGAGCATT TTTTATACTG TCTGTTAAAG
GATAAGGAAG GTCTGTTACC AAAATTATTT CAAAAGATGG ACATTAACAC AGAAGTATTT
CTTGCTCAGT TACAGGGGTT ATTAAATAAA CGTCCCAAAG TTAGTGGTGG GGAAGTTTAT
ATCAGTAATG ACTTAAATAA AGTATTAATT TATGCAGAAA ATGAAGCTTC TGCAATGGGG
GACCAGTATG TCTCTGTAGA GCATCTGTTC CTTAGTTTGT TAAAGTATCC GAATATAGAG
ATAGCGAGGT TGTTAAAGGA CTTTAATATT AATAAGGATA GATTTTTATC TGCGCTTGCT
TCTGTTCGTG GTAACCAACA GGTTCGAAGC GATAACCCGG AAGCAACCTA TGATACACTT
GAGAAATATG GTGTTGATTT AGTAGAGCGT GCAAAGAATC AAAAGCTAGA TCCAGTCATT
GGTCGTGATA GCGAGATTCG TAATGTGGTT CGTATCCTAT CTAGAAAGAC GAAAAATAAT
CCAGTGTTAA TTGGTGAACC AGGTGTTGGT AAAACCGCTG TAGTAGAAGG TTTAGCGCAA
CGTATTGTTC GTGGTGATGT ACCAGAAGGG TTAAAGGATA AGCGCCTTTT TGCTCTTGAT
ATGGGGGCTC TGGTAGCAGG TGCTAAATAT CGAGGCGAGT TTGAGGAACG TTTAAAAGCA
GTTCTTGATG ATGTAAAAAA CAGTGATGGT CAGATTATTC TATTTATCGA TGAGCTTCAT
ACGATTGTCG GTGCAGGGAA AACTGATGGT GCCATGGATG CTGGTAATAT GCTAAAACCT
ATGTTAGCTC GTGGAGAGCT TCATTGTATT GGTGCTACGA CCCTGAATGA ATATCGTATG
TATATTGAAA AGGATGCAGC TCTTGAGAGG AGATTCCAGC CAGTCATGGT GGAGGAACCT
ACAGTTGAGG ATACGATCTC TATCTTGCGT GGGCTAAAAG AGCGTTATGA AGTATTCCAT
GGTGTAAAAA TTACAGATGC TGCTTTAGTA AGTGCAGCTG TTTTAAGTAA TCGTTATATC
TCGGACCGTT TCCTTCCGGA TAAAGCAATT GATTTAGTTG ATGAGGCTTG TGCTTTAATT
AAGACAGAAC TTGATTCGAT GCCAACTGAG CTAGATGATA TATCACGTCG TATTATGCAG
ATGGAAATAG AAGAAGCAGC ACTGAAAAAA GAGGATGATC GTCTAAGTAA AGAACGTCTT
TTAAGTCTGC AAAAAGAATT AGCAGAGCTT CGAGAAGACT TTAATGAAAG AAAAGCAAAA
TGGGATAATG AAAAAGCTGC GGTAGAAAAA GTCCAAAAGC TTCGAGAAGA ATTGGAAGCC
ATTAACAACG AAATTCAAAA TGCAGAGTTA AATTATGACC TAAATAAAGC CGCAGAGTTA
AAATATGGAC GTTTGCCAAG CCTTCGTAAG CAACTTGAAT TAGAGGAAGA GAAAGTGAAA
CAAGAGGCTC ATACCTTAGT TCATGAAAGT GTGAGTGAGG AAGAAATTGC ACGTGTTGTT
TCCCGTTGGA CAGGAATACC GGTAGCGAAG TTAACGGAAA GCGAACGAAA TAAAACCCTA
CATCTTGACG AGGAGCTTCA TAGAAGAGTG ATAGGACAAG AGGAGGGTGT ACGACGTGTT
GCAGATGCTC TGCTTCGTTC TAAGGCTGGT ATTAAAGATC CAAGCAAGCC AATAGGTTCG
TTCCTATTTC TAGGACCTAC AGGCGTAGGT AAAACAGAAC TAGCCAAAGC ACTTGCAGAG
TCCTTATTTG ACAATGAACA AAATATTGTT CGTATCGATA TGAGTGAATA TATGGAGAAA
TATTCTGTCA GCAGATTAAT CGGAGCGCCT CCAGGATATG TTGGATATGA TGAGGGAGGA
CAACTTACGG AAGCTGTTCG TAGAAAGCCA TATTCGGTAG TACTATTTGA TGAAATTGAA
AAGGCTCATC CGGACGTGTT TAATATCTTA TTACAGGTAC TTGATGATGG ACGTATTACA
GACTCTACAG GCCGTACCGT AGACTTTAAG AATACGATCT TAATCATGAC TTCTAATATT
GGCTCTACCT ATCTATTAGA CGGTATTGAT GAAACAGGTG AAATTAGTAC ACAGGCTGAG
AGCTTGGTTA TGGAAGATTT GCGTGCTCAT TTTAGACCAG AGTTTTTAAA TCGATTGGAT
GAGATCATAT TATTTAAACC ATTAAATAAG GAAGATATTC GTAGTATTGT TGATTTATTA
ATCACTAATC TTAATAAACG ACTTGAAGAC CGCAGTATTC GTGTAGAATT AACCGACACA
GCGAAACAGC TAGTAATTGA TAAAGCTTAC GACCCAGTTT ATGGTGCACG TCCATTAAAG
AGATATCTAC AAAAGAACGT TGAGACTTTA AGTGCCAGAT TAATTTTAAG TGATCAGGTA
AAAGAAGGTG ATACTATCTT AATTGATACA GAAGGTGATA AATTAACGGC AAGGGTTAAG
AGCTAA
|
|---|
| Protein sequence | MNISKFTQKS LKAVQDCEKL AYEYGHQQID EEHFLYCLLK DKEGLLPKLF QKMDINTEVF
LAQLQGLLNK RPKVSGGEVY ISNDLNKVLI YAENEASAMG DQYVSVEHLF LSLLKYPNIE
IARLLKDFNI NKDRFLSALA SVRGNQQVRS DNPEATYDTL EKYGVDLVER AKNQKLDPVI
GRDSEIRNVV RILSRKTKNN PVLIGEPGVG KTAVVEGLAQ RIVRGDVPEG LKDKRLFALD
MGALVAGAKY RGEFEERLKA VLDDVKNSDG QIILFIDELH TIVGAGKTDG AMDAGNMLKP
MLARGELHCI GATTLNEYRM YIEKDAALER RFQPVMVEEP TVEDTISILR GLKERYEVFH
GVKITDAALV SAAVLSNRYI SDRFLPDKAI DLVDEACALI KTELDSMPTE LDDISRRIMQ
MEIEEAALKK EDDRLSKERL LSLQKELAEL REDFNERKAK WDNEKAAVEK VQKLREELEA
INNEIQNAEL NYDLNKAAEL KYGRLPSLRK QLELEEEKVK QEAHTLVHES VSEEEIARVV
SRWTGIPVAK LTESERNKTL HLDEELHRRV IGQEEGVRRV ADALLRSKAG IKDPSKPIGS
FLFLGPTGVG KTELAKALAE SLFDNEQNIV RIDMSEYMEK YSVSRLIGAP PGYVGYDEGG
QLTEAVRRKP YSVVLFDEIE KAHPDVFNIL LQVLDDGRIT DSTGRTVDFK NTILIMTSNI
GSTYLLDGID ETGEISTQAE SLVMEDLRAH FRPEFLNRLD EIILFKPLNK EDIRSIVDLL
ITNLNKRLED RSIRVELTDT AKQLVIDKAY DPVYGARPLK RYLQKNVETL SARLILSDQV
KEGDTILIDT EGDKLTARVK S
|
|---|
| |