| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3776 |
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| Symbol | |
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| ID | 5744728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 4628800 |
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| End bp | 4629471 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294888 |
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| Product | hemolysin III family channel protein |
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| Protein accession | YP_001560862 |
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| Protein GI | 160881894 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000709821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAATGA AAAGACAAGC TACAGCCAAA TTCAAATTTA AAGACCCTGG AAGTGCTATT
TCGCACCTTA TCTTTACGAT TATTGCATTA ATTGCAACGC CTCCACTTTT ACTTAAGGCA
TATCATATGC CTGGACATAT TCCGCTATTG TCCATGATTT TATTCCTGCT TGGAGTTGTC
TCTTTATATA GTGCAAGCAC GATATATCAC TCCTTCGATA TCTCCGAGGA GATTAATACA
AAATTACGAA AAATAGATCA TATGATGATT TATGTTTTAA TAGCTGGTTC CTATTCACCT
ATCTGCTTAA TTGCTCTGGG AAATAAAACA GGTCTTGTTC TTTTTATCAT CATTTGGTCT
CTTGCACTCC TTGGAATCTT CCAAGCACTT TTCTTTATTC ACTGTCCAAA ATGGGTAAGT
TCAACTATTT ACATTGCGAT GGGATGGAGC TGTATCTTTT CCTTCACACA ATTAGTTAGC
TCTCTTTCAA GACCTGCTTT CTTGTGGCTA CTTGCCGGCG GAATTATTTA TACAGTAGGT
GGTGTTATCT ATGCATTGAA GCTTCCAATT TTTAATGGAC GCCATAAAAA TTTTGGATCA
CATGAAATTT TTCATCTATT TTGCATTGGT GGTACACTTT GTCATTATAT CTTGATGTAT
TACTTAGTCT AG
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| Protein sequence | MEMKRQATAK FKFKDPGSAI SHLIFTIIAL IATPPLLLKA YHMPGHIPLL SMILFLLGVV
SLYSASTIYH SFDISEEINT KLRKIDHMMI YVLIAGSYSP ICLIALGNKT GLVLFIIIWS
LALLGIFQAL FFIHCPKWVS STIYIAMGWS CIFSFTQLVS SLSRPAFLWL LAGGIIYTVG
GVIYALKLPI FNGRHKNFGS HEIFHLFCIG GTLCHYILMY YLV
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