Gene Cphy_3729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3729 
Symbol 
ID5742928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4583287 
End bp4583991 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content37% 
IMG OID641294841 
Productadenosylhomocysteine nucleosidase 
Protein accessionYP_001560815 
Protein GI160881847 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0775] Nucleoside phosphorylase 
TIGRFAM ID[TIGR01704] 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0841667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGACA TTATGATTGG AATTATTGGT GCAATGGATG AGGAAGTAAC TCAGTTAAAA 
AATAAAATGC AACAAGTAAC AATTACTAAA AAAGCTGGAA TGGACTTTTA TAGCGGAAAC
TTCGGGGATA GAGCCGTTGT CATCGTTCGC TCAGGAATTG GTAAGGTGAA TGCTTCGATT
TGTACTCAAG TTCTTGTGGA TGAATTTCAC GCTTCTGCTA TAATCAATAC AGGTATTGCT
GGTTCTTTAA ATAATGACAT CAATATCGGT GACATCGTTC TATCAACAGA CGCGCTTCAA
CATGACGTTG ATGCTGTGGC TTTTGGATAT AAACTTGGTG TAATCCCTCG AATGGAGACA
TCAATATTCA AAGCAGATGA AAAACTATTA ACGAAAGCAG AGAGATTATG TAAAAAAGTT
AATCCAGACA TCTCTGTATT TAAAGGTCGT ATTGTAACAG GTGATCAATT TATTGCAAAT
AAAGACCAAA AAGATAGACT AGTTACTAAT TTTTCCGGAT TTTGTACTGA GATGGAAGGT
GCTGCAATCG CTCAAGCCGC ATACTTAAAC CAGATACCAT TCTTAATTAT CCGTGCTATC
TCAGATAAGG CAGATAACAG TGCAACCGTT GATTATCCAA CCTTTGAAGC TAAGGCAATT
GAGCATACTG TAAATCTAGT AACCGCTTTA ATTCCAGAGA TTTAA
 
Protein sequence
MEDIMIGIIG AMDEEVTQLK NKMQQVTITK KAGMDFYSGN FGDRAVVIVR SGIGKVNASI 
CTQVLVDEFH ASAIINTGIA GSLNNDINIG DIVLSTDALQ HDVDAVAFGY KLGVIPRMET
SIFKADEKLL TKAERLCKKV NPDISVFKGR IVTGDQFIAN KDQKDRLVTN FSGFCTEMEG
AAIAQAAYLN QIPFLIIRAI SDKADNSATV DYPTFEAKAI EHTVNLVTAL IPEI