Gene Cphy_3678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3678 
Symbol 
ID5742702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand- 
Start bp4518411 
End bp4518959 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content39% 
IMG OID641294788 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001560764 
Protein GI160881796 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0000000970157 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAAAA TAACAGTTAC AGAATGTGGT ATTGATGGGC TATTTGTAAT TGAACCAACA 
ATATTTAAAG ACAATCGTGG ATACTTTATA GAGACGTATC ATAAAGAGGC ATATGAAGCC 
GCAGGGATTA CCGCAGAGTT TATACAGGAC AACCAGTCAA TGTCAAAAAA GGGAGTACTA 
AGAGGGCTTC ATTTTCAAAT CAATTACCCG CAAGCGAAAC TCGTTCGTGT ATTAAGTGGT 
GAGGTTTTTG ATGTGGCAGT AGATCTTCGA AAAGGCTCCA AAACATTTGG TAAATGGTAT 
GGTGTAGTGC TTAGTGAAGA GAATCAAAAG CAATTTTTTG TACCAGAGGG ATTTGCACAT 
GGATATTTAG TCTTATCTGA TACTGCTGTG TTTGCTTATA AGTGTACTGA CTTCTATCAC 
CCGGGTGATG ATGGTGGACT ACTTTGGAAT GATCCTGAGG TTGGTATTGA GTGGCCAATT 
CCAGAAGATA TGGATTTAGT TATTGCACAA AGGGATCAAG AATGGGGAAC TTTAGCCGAT 
ATAAAATAG
 
Protein sequence
MGKITVTECG IDGLFVIEPT IFKDNRGYFI ETYHKEAYEA AGITAEFIQD NQSMSKKGVL 
RGLHFQINYP QAKLVRVLSG EVFDVAVDLR KGSKTFGKWY GVVLSEENQK QFFVPEGFAH 
GYLVLSDTAV FAYKCTDFYH PGDDGGLLWN DPEVGIEWPI PEDMDLVIAQ RDQEWGTLAD 
IK