Gene Cphy_3666 details

Gene Information

• Locus tag: Cphy_3666
• Symbol: rplD
• ID: 5742690
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: -
• Start bp: 4504620
• End bp: 4505240
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641294776
• Product: 50S ribosomal protein L4
• Protein accession: YP_001560752
• Protein GI: 160881784
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.000000000305367
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATG TAAAGGTTTA TAATATAGAA GGTAAAGAAG TTGGTTCATT AGAACTTAAC 
GATGCTATCT TTGGAGTAGA AGTAAATGAG CATTTAATGC ACATGGCTGT AGTTAGCCAG 
CTTGCTAACA AACGTCAGGG CACACAGAGC GCAAAGACTC GCGCAGAAGT GAGCGGCGGC 
GGAAGAAAGC CTTGGAGACA GAAGGGAACT GGCCATGCAA GACAGGGTTC AACAAGATCT 
CCACAGTGGA AAGGCGGCGG CGTTGTATTT GCTCCAAAGC CAAGAGATTA CTCTTTCAAG 
ATGAATAGAA AAGAGAAATC TTTAGCTATC AAATCTGCTT TAACATCCAG AGTTGAAGCT 
CAGAAGTTAA TCGTATTAGA TTCCATGAAC ATGGATGAAA TTAAGACAAA GAAGTTCAAG 
GCTGTACTTG AAAACTTAAA AGTTAACAAA GCATTAGTAG TTCTTGACAA GAAGGATGAG 
AATGTAATCC TTTCTGCAAG AAACATTCCA ACGGTAAGAA CAGCAACATC AAACGCTATC 
AATGTATATG ACATTGTAAA GTATGATACC TTAGTAATTA CCAAGGATGC AGTGGCACAG 
ATTGAGGAGG TGTACGCATA A 

 

Protein sequence

MANVKVYNIE GKEVGSLELN DAIFGVEVNE HLMHMAVVSQ LANKRQGTQS AKTRAEVSGG 
GRKPWRQKGT GHARQGSTRS PQWKGGGVVF APKPRDYSFK MNRKEKSLAI KSALTSRVEA 
QKLIVLDSMN MDEIKTKKFK AVLENLKVNK ALVVLDKKDE NVILSARNIP TVRTATSNAI 
NVYDIVKYDT LVITKDAVAQ IEEVYA