Gene Cphy_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3649 
SymbolrpmD 
ID5742673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4496890 
End bp4497072 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content33% 
IMG OID641294759 
Product50S ribosomal protein L30 
Protein accessionYP_001560735 
Protein GI160881767 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1841] Ribosomal protein L30/L7E 
TIGRFAM ID[TIGR01308] ribosomal protein L30, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.66459e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTAATA AATTAAAGAT TACTTTAACA AAATCTACTA TCGGTGCTCT TCCAAAGCAT 
AAATTAACTG TTAGCGCTCT TGGTCTTGGA AAACTTCATA GTACTAATGA AGTTCCAGAC
AATGTAGCTA TCAGAGGTAT GCTTAAGCAA GTTAAGCATT TAGTAATGGT AGAAGAGATT
TAA
 
Protein sequence
MANKLKITLT KSTIGALPKH KLTVSALGLG KLHSTNEVPD NVAIRGMLKQ VKHLVMVEEI