Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3647 |
Symbol | |
ID | 5742671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4495093 |
End bp | 4496421 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641294757 |
Product | preprotein translocase, SecY subunit |
Protein accession | YP_001560733 |
Protein GI | 160881765 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0201] Preprotein translocase subunit SecY |
TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00118801 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAAAA CGGTCAGAAA TGCCTTTAAG ATTAAAGATA TTAGAAACAA GCTTTTATTT ACGTTTATGG TTTTGATTAT CGTACGTCTT GGTTCACAGC TCCCGGTTCC GGGAGTGAAC CAGGCGGTAA TCGCCAATTG GTTACAGAAC AACTTCGGTA GTGGTCTTAG TTTCCTGGAT TCCTTTACTG GTGGTTCCTT TACTAGAATG TCCTTATTTG CTCTTGGTAT CGGACCATAC ATTACTTCCT CGATCATCAT GCAGTTATTA ACGATTGCAA TTCCTAAGCT AGAAGAGATG CAAAAGGATG GAGAATCTGG AAGAAAGAAA ATCGCAGAAA TTTCAAGATA TGTTACTATT GGACTATCTA TTATTGAATC TGTAGCTATG GTTATAGGCT TTAGTGGTTC AGGTGCTTTA GAGGGTGGTT TAACCTTCAC TAACATTGTT GTCATTACTG CATCTTTCAC CGCTGGTTCC GCAATTCTTA TGTGGTTAGG TGAAAGAATA ACTGAAAAGG GTGTAGGTAA TGGTATCTCT GTCATCCTGT TAATTAACAT TGTTGCTAAT ATGCCAAGAG ATATCTATGG ATTAATCGAG AAGTTTGTCC TTGGAGAAAG TGTTGTTAAG GGTGTAACTG CCGCTATCAT CATCGTCGCA GTAATATTAC TATCTGTTGT ATTAATTATC CTACTTAATG CTGCACAGAG AAAAATCGCT GTACAGTATG CTAAGAAGGT GCAAGGTAGA AAAATGGTAG GTGGACAATC CTCCCATATT CCGTTAAAAG TAAATACTGC AGGTGTTATC CCAGTAATCT TTGCGGTATC TATCATGCAA TTCCCTATTA TTATTGCTTC ATTCTTTGGA GTTCAGCCAG CTAGAGCTTA CTTCTGGCCA AAGGTATTAC ACATGCTAAA CTCCCAAAGC TGGTTCAACA TTAAGAACGG TGAATTCAAA TATACTGTTG GTGTACTTAT TTATATGGCA TTGATCGTAT TCTTTGCATA TTTCTATACA TCCATTACTT TCAATCCAAT GGAAGTAGCA AACAATATGA AGAAACAGGG TGGCTTCATT CCTGGTATTC GTCCAGGTAA GCCAACGACT GAGTACTTAA CAAAGGTTTT GAATTACATT ATCTTTATCG GTGCAATTGG TCTTATGATT GTTGCAATTA TCCCGATTTT CTTCTCTGGT ATGTTTGATG CACATGTATC CTTTAGCGGT ACATCATTAA TCATCGTAGT CAGTGTTGTA CTTGAGACAA TGAAGCAGGT GGAATCACAA ATGCTCGTTC GTCATTATAA AGGTTTCTTA AATGACTAA
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Protein sequence | MLKTVRNAFK IKDIRNKLLF TFMVLIIVRL GSQLPVPGVN QAVIANWLQN NFGSGLSFLD SFTGGSFTRM SLFALGIGPY ITSSIIMQLL TIAIPKLEEM QKDGESGRKK IAEISRYVTI GLSIIESVAM VIGFSGSGAL EGGLTFTNIV VITASFTAGS AILMWLGERI TEKGVGNGIS VILLINIVAN MPRDIYGLIE KFVLGESVVK GVTAAIIIVA VILLSVVLII LLNAAQRKIA VQYAKKVQGR KMVGGQSSHI PLKVNTAGVI PVIFAVSIMQ FPIIIASFFG VQPARAYFWP KVLHMLNSQS WFNIKNGEFK YTVGVLIYMA LIVFFAYFYT SITFNPMEVA NNMKKQGGFI PGIRPGKPTT EYLTKVLNYI IFIGAIGLMI VAIIPIFFSG MFDAHVSFSG TSLIIVVSVV LETMKQVESQ MLVRHYKGFL ND
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