| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3639 |
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| Symbol | |
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| ID | 5742663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4489723 |
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| End bp | 4490682 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294749 |
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| Product | DNA-directed RNA polymerase, alpha subunit |
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| Protein accession | YP_001560725 |
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| Protein GI | 160881757 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00120456 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTTTGATT TTGAAAAACC AAAAATTGAG ATAGCTGACA TTTCAGAAGA TAAGAAATAT
GGCCGATTTG TTGTCGAGCC TCTTGAGAGA GGATATGGCA CAACTCTTGG CAATTCTTTG
AGAAGAATTA TGCTTTCATC TTTACCTGGT GCTGCTGTCA GTCAAGTTAA AATTGACGGC
GTTGTTCATG AATTCTCCCC AATTCCTGGC GTTAAGGAAG ATGTAACAGA GATTATTATG
AACATTAAGA ACCTAGCAAT TAAAAACACA AGCGAGACGA ATGAGCCAAA GACTGCATAT
ATTGAGTTCG AAGGCGAAGG CGTGGTTAGA GCAGGCGATA TCCAAGCAGA TCCTGATATT
GAGATATTAA ATCCAGAATT AGTAATTGCA ACTTTAAGCG GTGGCGCTGA TAGCAAGCTG
TATATTGAGC TGACAATTAC AAAAGGCAGA GGTTATATCA GTGCAGATAA GAATAAAAAC
GATGATTTAC CAATCGGTGT AATCGCAGTG GATTCTATTT ACACTCCTGT TGAGCGTGTT
AATTTATCAG TTGAAAATAC ACGTGTTGGT CAGATTACCG ATTTCGATAA ACTGACACTT
GATGTATTTA CTAACGGAAC CTTAGGTCCG GATGAAGCTG TTAGCTTGGC TGCAAAAGTA
TTAAGCGAGC ACTTAAACTC CTTTATTGAT CTTTCCGAGA ATGCTAAGAC TGCTGAAGTC
ATGGTAGAGA AGGAAGACAA TGAGAAAGAA AAAGTGTTAG AGATGAATAT CGACGAGTTA
GAATTGTCTG TTCGTTCTTA CAACTGTTTG AAGAGAGCGG GAATTAATAC TGTCGAAGAA
TTATGTAACA GGACTTCTGA AGATATGATG AAGGTAAGAA ACCTTGGACG TAAGTCATTA
GAAGAAGTAT TAGCTAAGCT CAAAGAGCTT GGATTATCAT TAAATTTGAG CGACGATTAA
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| Protein sequence | MFDFEKPKIE IADISEDKKY GRFVVEPLER GYGTTLGNSL RRIMLSSLPG AAVSQVKIDG
VVHEFSPIPG VKEDVTEIIM NIKNLAIKNT SETNEPKTAY IEFEGEGVVR AGDIQADPDI
EILNPELVIA TLSGGADSKL YIELTITKGR GYISADKNKN DDLPIGVIAV DSIYTPVERV
NLSVENTRVG QITDFDKLTL DVFTNGTLGP DEAVSLAAKV LSEHLNSFID LSENAKTAEV
MVEKEDNEKE KVLEMNIDEL ELSVRSYNCL KRAGINTVEE LCNRTSEDMM KVRNLGRKSL
EEVLAKLKEL GLSLNLSDD
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