| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3618 |
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| Symbol | |
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| ID | 5742642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4468402 |
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| End bp | 4469928 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294728 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001560704 |
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| Protein GI | 160881736 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000797588 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACTA ATCCGATTCT ACGTTTGGAT TATCCGGATC CGGATGTAAT CCGTGTTGAT
GACACGTATT ATATGGTGAG TACAACGATG CATTTCATGC CAGGTTGTGA GATCTTGCGT
TCTTATGATT TGATTCATTG GGAACATGCC TCTTATGTTT ATGAGGTTTT GGATAGTACA
CCAGCTCAGA GATTACAGGA TGAGGAAAAT ATATACGGGA AAGGCATGTG GGCTGCTACA
CTTCGTTATA ACAAAGGATT CTTTTATATC TTATTTGTAG CAAATGATAC TAGAAAAACT
TATCTCTATA CTTCAAAACA GGTAATAGGG CCGTGGAAGA AACAGCAAGT GGAGGGTTTT
TATCATGATG CATCTCTTCT TTTTGATGAT GATAGAGTTT ATATAGTTTA TGGGAATAAA
CAAATATATA TAACAGAATT AAGAGAAGAT CTTTTAGGTC CTAAACCGAA TGGGCTTCAT
CGTATGATTA TTTCTGAGGA CTGGAACCCA ATGCTTGGCT ATGAAGGTTC ACATATCTAT
AAAATACATA ACAAATACTA CATATTTCTT ATTCATTCGG ATGCAAAGGA ATGGAAACGA
ATTGAGGCTT GCTTTGTTTC AGACTCCTTA GATGGTACTT TTATTGGCGG AGATATATTA
AATGATGATA TGGGGTATCG AAACCTGGGA GTAGCACAGG GTGGAATTGT TGACACGAAA
GATGGAGAAT GGTATGCCAT TTTATTTCAG GATAGGGGAG CGGTTGGAAG GATTCCGGTA
TTAGTACCAG TGACATGGGT GAATGATTAT CCGGTATTTG GTGAAGATGG TAAGGTACCA
AAAATGATAA CAACCAGTAG TCTTAAGCCT CAGTATACCT ATCAGCCCCT AGTAGGAAGT
GACGATTTTG TTTATGATTC CAACGACATA AGAGAAAGAA AACTAAAATC TTTTTGGCAG
TGGAATCATG AACCTGACTC TAAAGCATGG TTGATTGATC AAAATAAGAA TGGCTATTGT
ATCCGTACTC AAAAACTTTC TAAGGATATG ACACAGGCGA ATAATACCCT AACACAGCGA
ATGAGATTTC CTAACTGTGC TGCTTTTGTC ACTGTGGACG GAGCAGAGTT AAACGATGGT
GATTATGCTG GAATTGGAGC GTTACAGGGA TGCTTTGGCA TGATAGCCTT AACGCGTGAG
AATGGAGAAT ATTATATCTG TATGCAGGCT AGGGAGGCAA CGAATACTTC TTTAGAGGCG
GAAACGGAAA ACGCCCATGG CATAGAGTAT GCTAGAATTC CAGTAAACAG CCACGAAGTC
ACCTTTAAGC TTTCGGTTGA TTTTATGAAT CAGAAAGATG AAGCAAAGTT TTATTATCTA
ACTGAAAATG GTTTTGAACA ACTTGGTATC GTACATTCTT TATATTTTAA GTTAGATCAT
TTTGCAGGCT GTCGATTCGC ATTATTTAAT TATTCAACGA AACAATATGG AGGCGTTGCA
TGCTTTCAGA ATTTTGTCTA TGAGTAA
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| Protein sequence | METNPILRLD YPDPDVIRVD DTYYMVSTTM HFMPGCEILR SYDLIHWEHA SYVYEVLDST
PAQRLQDEEN IYGKGMWAAT LRYNKGFFYI LFVANDTRKT YLYTSKQVIG PWKKQQVEGF
YHDASLLFDD DRVYIVYGNK QIYITELRED LLGPKPNGLH RMIISEDWNP MLGYEGSHIY
KIHNKYYIFL IHSDAKEWKR IEACFVSDSL DGTFIGGDIL NDDMGYRNLG VAQGGIVDTK
DGEWYAILFQ DRGAVGRIPV LVPVTWVNDY PVFGEDGKVP KMITTSSLKP QYTYQPLVGS
DDFVYDSNDI RERKLKSFWQ WNHEPDSKAW LIDQNKNGYC IRTQKLSKDM TQANNTLTQR
MRFPNCAAFV TVDGAELNDG DYAGIGALQG CFGMIALTRE NGEYYICMQA REATNTSLEA
ETENAHGIEY ARIPVNSHEV TFKLSVDFMN QKDEAKFYYL TENGFEQLGI VHSLYFKLDH
FAGCRFALFN YSTKQYGGVA CFQNFVYE
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