| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3556 |
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| Symbol | |
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| ID | 5742960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4389160 |
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| End bp | 4390671 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294667 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001560644 |
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| Protein GI | 160881676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000444514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACAG TGGCAGAGGA GAATAAGGTT CAAAACGCAA ATAACGCGCA AGATGTAAAT
GAATTAATTA AAGTAAAAAT GCAAAAGCTT GCTGATTTAC AAGAAGCAGG AAAAGATCCG
TTTCAGATTA TGAAGTATGA TGTGACTCAT CATACTATAG ATGTCAAAGA TAACTTTGAG
AATTTAGAAG GTCAAATCGT AGCAATTGCT GGTAGAATTA TGACAAAGCG AGTGATGGGT
AAAGCTTCCT TTATCAATAT TCAGGACAAG CTTGGTAATA TTCAATCCTA TATTCAAAGA
GACAGCATAG GTGAGGAAGA ATATGCTGGA TTTAAGAAGT TTGATATCGG TGATATCGTA
GGTATCAAAG GAGAGGTATT CAAAACACAC GCAGGGGAAA TCTCAGTACG TGCAAATGAA
ATTCTTCTAT TATCAAAATG TTTACAAGTA TTACCTGAAA AGTTCCATGG TTTAACAGAT
ACAGATACAA GATATCGTCA AAGATATGTA GACTTAATGA TGAATCCAGA AGTAAAAGAG
ACATTTATTA AGCGTTCTGC AATCATCCGT GAAATCCGTA ATTATTTAGA TGGAGAAGAC
TTTATTGAAG TAGAAACTCC AGTTTTAGTT AAGAATGCAG GTGGTGCTGC TGCAAGACCA
TTTATGACAC ATCACAATTC TTTAGATGAA GACTTAAACC TAAGAATATC CTTAGAATTA
TATTTAAAGA GATTGATTGT TGGTGGTTTA GAAAGAGTAT ATGAAATCGG TAGAGTATTC
CGTAACGAAG GCTTATCTGT TCGTCATAAC CCTGAATTTA CTCTACTTGA GTTATATCAA
GCATACACTG ATTATAACGG AATGATGGAT TTAACAGAAA AATTATTCCG TACCGTGGCA
GAAAAAGTAA TTGGTACAAC AAAGATTTCC TATGAAGGTG TTGAAATCGA CTTAGGCAAA
CCATTTGAGC GTATTACCAT GGTAGAAGCA GTAAAGAAAT ATAAAGGTAT TGACTTTGAT
CAGGTTAAGA CAGAAGAAGA GGCTAAGGCT CTTGCAAAAG AGCATCATGT TTCTTTTGAA
GACAGACATA AAAAGGGTGA TATCTTAAGC TTATTCTTCG AAGAATTTGT AGAAGAGCAT
CTAATACAAC CAACCTTTGT AATAGATCAT CCAGTTGAAA TTTCTCCACT TACAAAGAAG
AAACCAGAGA ACCCAGAGTA CACAGAGCGA TTTGAGTTGT TTGTGACTAA GAGAGAAATG
GCAAATGCAT ACTCTGAGTT AAATGATCCA ATCGATCAAA GAGAACGTTT TGTGGCACAA
GAAGCATTAA AAGCTGCTGG AGATGAGGAA GCAAACTCCA TGGACGAAGA TTTCCTAAAT
GCATTAGCAT ATGGTATGCC TCCAACTGGT GGTATCGGTA TTGGAATCGA CCGTCTCGTA
ATGTTATTAA CGGATTCTTC TGCAATCCGC GATGTATTAT TGTTCCCTAC TATGAAGAGC
CTAGATAAAT AA
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| Protein sequence | MKTVAEENKV QNANNAQDVN ELIKVKMQKL ADLQEAGKDP FQIMKYDVTH HTIDVKDNFE
NLEGQIVAIA GRIMTKRVMG KASFINIQDK LGNIQSYIQR DSIGEEEYAG FKKFDIGDIV
GIKGEVFKTH AGEISVRANE ILLLSKCLQV LPEKFHGLTD TDTRYRQRYV DLMMNPEVKE
TFIKRSAIIR EIRNYLDGED FIEVETPVLV KNAGGAAARP FMTHHNSLDE DLNLRISLEL
YLKRLIVGGL ERVYEIGRVF RNEGLSVRHN PEFTLLELYQ AYTDYNGMMD LTEKLFRTVA
EKVIGTTKIS YEGVEIDLGK PFERITMVEA VKKYKGIDFD QVKTEEEAKA LAKEHHVSFE
DRHKKGDILS LFFEEFVEEH LIQPTFVIDH PVEISPLTKK KPENPEYTER FELFVTKREM
ANAYSELNDP IDQRERFVAQ EALKAAGDEE ANSMDEDFLN ALAYGMPPTG GIGIGIDRLV
MLLTDSSAIR DVLLFPTMKS LDK
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