| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3504 |
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| Symbol | |
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| ID | 5743615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4322606 |
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| End bp | 4323628 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641294614 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001560592 |
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| Protein GI | 160881624 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAAG AAAAAACTTT ATTAATAACT GGTGGAACAG GCTCCTTTGG TAATGCTGTG
CTTGAGAGAT TTCTTAATAC CGACATAAAA GAGATTCGCA TATTCTCTAG AGATGAAAAG
AAACAAGATG ATATGCGACA TAAATATAAT AATGATAAAA TTAAATATTA CATAGGAGAT
GTCAGGGATT TACAAAGCAT TAAAAATGCT ATGCATGGTG TTGATTATGT TTTTCAAGCT
GCAGCTTTAA AGCAAGTACC ATCATGCGAA TTTTTTCCGA TGGAAGCAGT AAAGACTAAC
ATCATAGGTA CAGACAATGT ATTAACAGCT TGTATAGAAG AGGGAGTGAA AAAGGTAATC
TGTTTATCCA CAGATAAAGC AGCTTATCCT GTCAATGCCA TGGGGACGTC GAAGGCTATG
ATGGAAAAGG TTTTTGTAGC GAAGTCGAGA ACAGTAGATC CAAACAAAAC GTTAATATGT
GGAACTCGTT ATGGTAATGT AATGTGCTCA AGGGGATCTG TAATACCATT ATTTATAGAA
CAAATAAAAG CTGGACAACC ACTTACTGTG ACAGAACCCA CAATGACTCG ATTTATTATG
AGCTTAGAAG AGGCTGTTGA GTTGGTTATA TTCGCTTTTC ACCATGCTGA AAGTGGAGAT
ATTATGGTTC AAAAGGCACC GGCAACAACT ATCGGAGTCT TGGCTCAAGC AATAAAAGAA
TTGTTTAATG TCGATAACGA AATAAAAACT ATAGGAATAC GCCATGGAGA AAAAATGTAT
GAAACATTAT TAACTAATGA AGAGTGTGCA CATGCAATAG ATATGGGCAA CTTTTATCGT
GTTCCTGCAG ATAAACGAGA TTTAAATTAT GATAAGTATT TTAAAGTTGG AGATCAAGGA
AGAGAAAAAT TATCTGAATT TAATTCTAAT AATACGCAGC TACTTACTAT AGAACAGACG
AAAGAAAAAT TATTAACATT ATCCTATATA AGAGAAGAAA TAGAAGCTTG GGAGAACCGA
TAA
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| Protein sequence | MFKEKTLLIT GGTGSFGNAV LERFLNTDIK EIRIFSRDEK KQDDMRHKYN NDKIKYYIGD
VRDLQSIKNA MHGVDYVFQA AALKQVPSCE FFPMEAVKTN IIGTDNVLTA CIEEGVKKVI
CLSTDKAAYP VNAMGTSKAM MEKVFVAKSR TVDPNKTLIC GTRYGNVMCS RGSVIPLFIE
QIKAGQPLTV TEPTMTRFIM SLEEAVELVI FAFHHAESGD IMVQKAPATT IGVLAQAIKE
LFNVDNEIKT IGIRHGEKMY ETLLTNEECA HAIDMGNFYR VPADKRDLNY DKYFKVGDQG
REKLSEFNSN NTQLLTIEQT KEKLLTLSYI REEIEAWENR
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