| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3494 |
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| Symbol | |
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| ID | 5743606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4309695 |
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| End bp | 4311578 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641294606 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_001560584 |
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| Protein GI | 160881616 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000299529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGGT ATATAAAGGA TAAACAGTTA TTGCTTCGAA GATTATGTTT GCTTTTGATA
GATATAGGAG CTGTTTGCTT AATCAGTATT TTATCTCTAT TAATTCGATA CGATTTTAGA
TATAAAAATA TAGATACGAT ATACCTTGAT ACTATATGGA CATATTTCCC TATTAACATC
ATTACAGTAC TACTAATATT CTATATTTTT CGCTTGTATC ACAGTTTGTG GTTATTTGCA
GGTATTACTG AGTTAGAGAA TATTATTGCT GCATCAATCG GGGTTTCAGC CTTACAAGTA
ATTGGTTTCA TACTTTTAAA GCTTCCAATT CCAAGAAGCT ATTTCTTCAT ATTTCCGGTT
TTATTAATTA TAGCTACCAT GGCTTCGAGA TTTACTTATC GCGCTGTTCG GGTGAAGTTA
CGGAAGAGAG AGAATGGGAA GTCCTGTGAG AATGTGATGG TAATTGGTGC TGGAGAAGCA
TCCAATATGA TAATCAAAGA AATAATAAAT AGTGACCATA TACATAAAGT AGTTAAGTGC
ATCATAGATG ATGCAGAAGA TAAATTAGGT CGCTATATCC ATGGAATTAA AGTTATTGGT
AGTCGAGACA CCATCATAGA TAATGTGATG AAGTATGAGA TAAATGAGAT TATCATAGCG
ATGCCATCGG TATCAAGAAA AGAAATTAGT AAAATCTTAG AAATCTGCAA AGAAACAGAT
TGTAAGTTAT ATATATTACC AGGAATGTAT CAATTTTTAA ACGGTGAAGT TGGTGTATCA
GAACTTCGCG GTGTTGAGGT TGAAGATTTA CTGGGACGAG ATCCTATAAG AGTAGATTTA
GACTCGATTA TGGGTTATGT AAGTGACAAG GTTGTTTTAG TTACTGGCGG CGGTGGTTCT
ATTGGAAGTG AACTTTGTAG GCAAATAGCA GGGCATAAAC CAAAGCAATT AGTTATCGTA
GATATCTATG AAAATAATGC TTATGATATA CAGCAGGAGC TACAGAAAAG ATATCCAAAT
TTAGATATTG TAACACTGAT TGGTTCGGTA CGTAATGAGA AACGACTTGA CAAAATATTT
GACACTTATC GCCCGAACAT TGTTTATCAC GCTGCAGCCC ATAAGCATGT ACCTTTAATG
GAAGATAGCC CAAATGAAGC TGTTAAAAAC AATGTTTTTG GAACATTTAA AACTGCCCAA
GCTGCCGATA AATATGGTGT TGAAAAGTTT GTATTAATTT CATCTGACAA AGCAGTTAAT
CCTACAAACA TCATGGGTGC AACGAAGCGT ATGTGTGAGA TGATTGTACA AACATTTAAT
AGAAAATCTA AAACTGAATT TGTAGCGGTT CGATTTGGTA ATGTACTCGG AAGTAACGGT
AGTGTAATTC CACTTTTTAA AAAGCAAATT GAAGCAGGTG GGCCTGTTAC CGTAACACAT
CCGGATATTA TCCGATATTT TATGACAATA CCAGAAGCGG TATCTTTAGT ATTACAAGCA
GGTGCCTATG CAAAGGGTGG AGAGATATTT GTACTGGATA TGGGAGAGCC AGTTAAAATT
CTTGATTTAG CTACAAACCT CATTCGCCTG TCTGGGTATA TACCAGATGT AGATATAAAA
ATTAAGTTTA CTGGATTAAG ACCTGGTGAA AAATTATATG AAGAGCTTCT TATGGAAGAG
GAGGGATTAG GTGAAACCGA AAACTCACAG ATATTTATTG GGAAGCCTTT AAAGATTGAT
GATGAAAAGT TTCATCATCA ATTAGAGGAG TTATACACCG CATGTAATAA CGAGACAGAG
TATATTCGAG AAATGGTCGG AGAAATCGTA GATACCTATT CTTATAATAT TGAAGCAAGA
GAAGAAGTTG CAGCTTCTGA ATAG
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| Protein sequence | MKRYIKDKQL LLRRLCLLLI DIGAVCLISI LSLLIRYDFR YKNIDTIYLD TIWTYFPINI
ITVLLIFYIF RLYHSLWLFA GITELENIIA ASIGVSALQV IGFILLKLPI PRSYFFIFPV
LLIIATMASR FTYRAVRVKL RKRENGKSCE NVMVIGAGEA SNMIIKEIIN SDHIHKVVKC
IIDDAEDKLG RYIHGIKVIG SRDTIIDNVM KYEINEIIIA MPSVSRKEIS KILEICKETD
CKLYILPGMY QFLNGEVGVS ELRGVEVEDL LGRDPIRVDL DSIMGYVSDK VVLVTGGGGS
IGSELCRQIA GHKPKQLVIV DIYENNAYDI QQELQKRYPN LDIVTLIGSV RNEKRLDKIF
DTYRPNIVYH AAAHKHVPLM EDSPNEAVKN NVFGTFKTAQ AADKYGVEKF VLISSDKAVN
PTNIMGATKR MCEMIVQTFN RKSKTEFVAV RFGNVLGSNG SVIPLFKKQI EAGGPVTVTH
PDIIRYFMTI PEAVSLVLQA GAYAKGGEIF VLDMGEPVKI LDLATNLIRL SGYIPDVDIK
IKFTGLRPGE KLYEELLMEE EGLGETENSQ IFIGKPLKID DEKFHHQLEE LYTACNNETE
YIREMVGEIV DTYSYNIEAR EEVAASE
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