Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3490 |
Symbol | |
ID | 5743602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4303959 |
End bp | 4304774 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641294602 |
Product | ABC transporter related |
Protein accession | YP_001560580 |
Protein GI | 160881612 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0299606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAAC AAAAATCATC GCCTAATATA AAGAAGGATA AATCTCAGAT TGAGCTTATC TGTTCTTCTT GTATGAACCA GCATGAATCC TGCTCAAAAG GAGCCTGTGG TCGTCATTGT ATTCGAATGA ATGATATTGG TGTTACAATA GGAAAGACAA CGATTATTGA ACATATTAAT TTGCATATCC ATTGTGGCAA ATTAACAGTC ATCATCGGGA AAAATGGCGC CGGAAAATCG ACGTTGATAA AAGCTATTCT TGGCGAACTA AAGCATGAGG GAACCATAGA ATTTAAAGAT ATGAAGAATA ATACTCTTCC AAAGATGACG GTAGGGTACG TTCCACAATC TCTAAATGTG GAGAAAAATA CACCAACCAG TGTATATGAT ATGTTTGCAG GATTAATTGA TAGTCGTCCT GTATTTTTAC CAAGAAAAAA ACGTCTATAT GAGGATATCA AAGAAAAACT ACGTTTTTTT GAGGCTCAGG ACTTAATTGA TAAGAGAGTT TGCGATTTAT CTGGTGGAGA ATTACAAAGA GTAATGTTAT CCATCGCATG TACCCCAACG CCAAACTTAC TATTACTTGA TGAACCGGTA TCTGGAATTG ATCGAAACGG TATGGAACTC TTTTATAGAA ATATTGAAAT GCTTAAAAAC AACTACGACT GTGCATTTAT CTTAGTTTCC CATGATCTAA AATTTGTAGA GAAATATGCT GATCATGTAA TTCTATTGGA TAAGCATATC TTAAAAGAGG GAACACCAAA AGAGGTTTTA TCAAGTAAAG AATTTAAAGA GGTGTTTGGA GCTTAG
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Protein sequence | MEQQKSSPNI KKDKSQIELI CSSCMNQHES CSKGACGRHC IRMNDIGVTI GKTTIIEHIN LHIHCGKLTV IIGKNGAGKS TLIKAILGEL KHEGTIEFKD MKNNTLPKMT VGYVPQSLNV EKNTPTSVYD MFAGLIDSRP VFLPRKKRLY EDIKEKLRFF EAQDLIDKRV CDLSGGELQR VMLSIACTPT PNLLLLDEPV SGIDRNGMEL FYRNIEMLKN NYDCAFILVS HDLKFVEKYA DHVILLDKHI LKEGTPKEVL SSKEFKEVFG A
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