Gene Cphy_3484 details

Gene Information

• Locus tag: Cphy_3484
• ID: 5743596
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 4296587
• End bp: 4298413
• Gene Length: 1827 bp
• Protein Length: 608 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 641294596
• Product: GTP-binding protein TypA
• Protein accession: YP_001560574
• Protein GI: 160881606
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000244002
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACGA AACGTGAAAA TGTAAGAAAT ATCGCAATTA TTGCCCATGT CGATCATGGT 
AAAACTACGC TCGTAGACGA GCTTCTAAAA CAGAGCGGTG TATTCCGTAG CAATCAAGTT 
GTAGAAGATC GTGTTATGGA CTCCGGTGAC ATAGAAAAAG AACGTGGTAT TACTATCCTA 
GCGAAAAACA CGGCTGTTAC TTATAAAGAT ACAAAAATTA ATATCATTGA TACTCCTGGC 
CATGCGGACT TTGGTGGCGA GGTAGAACGT GTTCTTAAGA TGGTAAATGG TGTTGTACTT 
GTAGTCGACG CCTTTGAAGG TGCCATGCCA CAAACGAAAT TCGTTCTTAA AAAGGCATTA 
GAACTTAGCT TACCAGTTAT CGTGTGTATT AATAAAATTG ACCGCCCAGA AGCTAGACCA 
ACCGAAGTTA TTGATGAAGT GTTAGAACTC TTCATTGACC TAGATGCTAG CGAAGAACAG 
CTTGACTGTC CATTTATCTT CGCTTCTGCA AAATCAGGAA TCGCAATTCT TGAATTAGAT 
CATACTCCAA AGAATATGGA GCCACTTTTT GAGACTATCC TTGAATACAT CCCTGCCCCA 
GAAGGTGATC CAGATGCAGG TACTCAAGTA CTCATTAGTA CCATCGACTA TAACGAATAC 
GTAGGTCGTA TTGGTGTAGG TAAAGTTGAT AATGGCGTAC TCCGTGTAAA TCAAGATGTT 
GTTATTGTAA ATGAGCATGA TCCAGACAAG TTTAAAAAGG TTAAAATAAA TAAGCTTTAT 
GAATTTGAAG GTTTGAAAAA GGTAGAAGTA AACGAAGCAA CTGTAGGTTC TATCGTTGCT 
GTCTCCGGTA TCTCAGACAT TCATATTGGA GATACCATCT GTTCTACTGA CAATGTGAAC 
CCAATCCCTT TCCAAAAGAT TTCTGAGCCA ACCATTGCAA TGCACTTTAT CGTAAATGAT 
AGCCCTCTTG CTGGACAAGA AGGTAAGTTT GTAACATCAA GACACTTAAG AGAACGTCTC 
TTCCGTGAAT TAAATACTGA CGTCAGCCTT CGTGTAGAAG AAACCGATAC CACAGAAAGC 
TATAAAGTAT CTGGCCGTGG TGAGCTTCAC TTATCCGTAT TAATTGAGAA CATGCGCCGT 
GAAGGCTTTG AGTTTGCTGT TAGTAAAGCT GAAGTATTAT ATCGTCATGA TGAAGCTGGT 
AAAAAGCTTG AGCCAATGGA AAGAGCATAC CTTGACGTTC CAGAAGAATT CTCCGGTACA 
GTTATCGAAA AATTAAGCCA GAGAAAAGGT GAACTCATTG GTATGTCATC TGCAAACGGT 
GGATACACTC GTCTAGAGTT TTCTATCCCT GCAAGAGGCT TAATTGGATA CCGTGGAGAG 
TTCATGACCG ATACGAAGGG AAATGGTATC ATCAACACAT CATTTGACGG TTACGGCCCT 
TATAAGGGAG ATATCCAGTA TCGTAAACAA GGTAGCTTGA TTGCTTTTGA ATCTGGTGAA 
GCGATTACTT ATGGTTTATT CAATGCACAA GAGCGTGGTT CCTTATTCAT CGGACCAGGC 
GAGAAGGTAT ATTCCGGAAT GGTAATTGGA CAGAACGGTA AAGCTGAAGA TATCGAGATT 
AATGTATGTA AGAGAAAACA GCTTAGTAAC ACTCGTTCCT CCAGTGCAGA TGAGGCACTC 
CGCCTTACAA CACCTAGAGT ATTAAGCTTA GAGCAAGCGT TAGAATTTAT CGATACCGAT 
GAGTTATTAG AGGTTACTCC AAAGAGCTTA AGAATTAGAA AGAAGATTCT TGATCCTACG 
ATGAGAAAGA GAGCAAGTAG AAATTAA 

 

Protein sequence

MNTKRENVRN IAIIAHVDHG KTTLVDELLK QSGVFRSNQV VEDRVMDSGD IEKERGITIL 
AKNTAVTYKD TKINIIDTPG HADFGGEVER VLKMVNGVVL VVDAFEGAMP QTKFVLKKAL 
ELSLPVIVCI NKIDRPEARP TEVIDEVLEL FIDLDASEEQ LDCPFIFASA KSGIAILELD 
HTPKNMEPLF ETILEYIPAP EGDPDAGTQV LISTIDYNEY VGRIGVGKVD NGVLRVNQDV 
VIVNEHDPDK FKKVKINKLY EFEGLKKVEV NEATVGSIVA VSGISDIHIG DTICSTDNVN 
PIPFQKISEP TIAMHFIVND SPLAGQEGKF VTSRHLRERL FRELNTDVSL RVEETDTTES 
YKVSGRGELH LSVLIENMRR EGFEFAVSKA EVLYRHDEAG KKLEPMERAY LDVPEEFSGT 
VIEKLSQRKG ELIGMSSANG GYTRLEFSIP ARGLIGYRGE FMTDTKGNGI INTSFDGYGP 
YKGDIQYRKQ GSLIAFESGE AITYGLFNAQ ERGSLFIGPG EKVYSGMVIG QNGKAEDIEI 
NVCKRKQLSN TRSSSADEAL RLTTPRVLSL EQALEFIDTD ELLEVTPKSL RIRKKILDPT 
MRKRASRN