Gene Cphy_3450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3450 
Symbol 
ID5743562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4243489 
End bp4245483 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content36% 
IMG OID641294563 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001560542 
Protein GI160881574 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGCC AAAGCATTAA AACAAGACTT ATTATACAAT TTACTGTTTT AATTTTGTTA 
GCCCTAATCA CTTCTGGAAT TATTACCATA AATATAGCGA GTAATATTAT AATTGAGGAA
GCGAAAACTA CGTTAGAAGC TTTAGCTTTA GATGCTGCTA AATTGGAAAG TAGTCGATTG
GAATCACAGA GAAAAATTCT AGATACAATT TCAGTAATGG AAGAAATGGA AAGTATGGAT
TTGCTTCAAC AGCAGCGACT TTTAAAACGA ATGGTTGACG AGACAGGTTT TATAGAGCTT
GGAATATTAT CACAGGATGG GACAATTGTT TATTCGCAAG GAAACAGTAT TAAAATCGAG
GATACTCATC CAGTGAGAAA TGCATTGAAT TCAAATGGAC ATGCGATTTC TTTCGGAATA
AGTGTTGCTA CAGGTGAAAT TACCCTAATA CAAGCAGTTT CGATAGAGAA TAATGGGGAG
GTATTAGGCG CACTGGTCGG ACGTATGGAC GGAAATTCTT TGAGTTTACT TGCTGCGGAT
ATTGGCTATG GAGAGGAAGG GTATTCCTAT ATCGTGGATA GTAAAGGTAC TGTAATAGGT
CATAAAAATC AAGACTATGT CATGAACCAG TTCTCACCAA TTGAAGAAGC GAAAACTGAT
GATAATTATA AATCTTTAGC TAAATCTTTT GAGAAGATAT TATCTCAGGA CAAAGGAACC
AGTAATTATC AATTTAATGG AGGAGATCAA TTTATTGGCT TTGCTAATGT TCCTGGAACT
GACTGGACCT TTGTTATTGT AGCTAGTAGA GCAGAAATCT TAAGTTCGGT ATCAGTACTG
CAAAGATCGA TAATTATAGT GGTTACAATA GTGCTTCTAA TAGGGATTAT ATTAACCTAT
AGTATTGGAA GTTCTTTAAC AAAACCAATT ATCAACACAA TTGAACACTC AAAAAAGATA
GCGAGTCTTG ATTTGAGATC TAATTTGGAT CAGAAATACT TAAAGAAAAA AGATGAAATT
GGTGAACTTG CAAGATCGCT TCAAAATATT ATTCATTCAC TTCGAACAAT ACTAATGGAG
ATACATAGTT CTTCAGAGCA ATTAAGTTCC TCATCGGAAG AGCTTACTGC CACCACCCAG
CAAGCATCTT CTGCAGCTTG TGAAATTGCG AAAACGATAG AAGAAATTGC GGATGGAGCT
TCCGAACAAG CAAAAAGTAC GGAGGTTGGT ACAAGCAAAG CCCAATCCTT AGGAAGAACA
ATAGAACTAG TAAAAGGCGA TATTGATAAG GTGAAGGATT CTTCAAGGCA GGTATCAAAT
GTCGTAACAG AAGGGCTAGA AGATATTGCT TTACTTAGTA AAATAACAGA TGAAAGTACA
GTAGCAGTAC ATGATATTTA CGAAGTAATT ATGGAGATGA ATGAGAGTTC AAATAAAATT
GGCGAAGCAA GTGGTGTGAT AGAATCGATT GCTGCTCAAA CTAATTTACT TTCTTTAAAT
GCGGCGATTG AAGCTGCAAG AGTCGGAGAG GCTGGTAAGG GATTCGCGGT TGTTGCAGAG
GAAATAAGAA AACTTGCAGA ACAATCCTCA AAATCAACGA AGTTAATTAA TGAGATCGTG
AGTGAATTAC AGCATAATAC GGAGAATGCT GTTACCACGA TAAAACGTGT CTCAGTCATC
TCAAACGAGC AGGCAAATAG TGTGGTTAGT AATAATCAGA AGTATGAAAT TATTGCAAAG
ACTATGACTA ATTCTATGGA TGCTATTAAG CAGTTAGATA GGTCAGGTGA TGATATGGAT
GTTATGAGAA AGGCTATTAT TGAAGAATTC GAGAGTCTAT CAGCGGTTGC TGAAGAAAAT
GCTGCTGCAA GCGAAGAGGT CTCTGCTTCG ACCGAAGAAC AAACCGCTTC CATCGAGGAA
ATATCGAATG CTAGCGATTA TCTATCTGAG TTAGCATCCA AGTTAAATTC TTTAGTTACT
GAGTTTAAAT TATAA
 
Protein sequence
MKSQSIKTRL IIQFTVLILL ALITSGIITI NIASNIIIEE AKTTLEALAL DAAKLESSRL 
ESQRKILDTI SVMEEMESMD LLQQQRLLKR MVDETGFIEL GILSQDGTIV YSQGNSIKIE
DTHPVRNALN SNGHAISFGI SVATGEITLI QAVSIENNGE VLGALVGRMD GNSLSLLAAD
IGYGEEGYSY IVDSKGTVIG HKNQDYVMNQ FSPIEEAKTD DNYKSLAKSF EKILSQDKGT
SNYQFNGGDQ FIGFANVPGT DWTFVIVASR AEILSSVSVL QRSIIIVVTI VLLIGIILTY
SIGSSLTKPI INTIEHSKKI ASLDLRSNLD QKYLKKKDEI GELARSLQNI IHSLRTILME
IHSSSEQLSS SSEELTATTQ QASSAACEIA KTIEEIADGA SEQAKSTEVG TSKAQSLGRT
IELVKGDIDK VKDSSRQVSN VVTEGLEDIA LLSKITDEST VAVHDIYEVI MEMNESSNKI
GEASGVIESI AAQTNLLSLN AAIEAARVGE AGKGFAVVAE EIRKLAEQSS KSTKLINEIV
SELQHNTENA VTTIKRVSVI SNEQANSVVS NNQKYEIIAK TMTNSMDAIK QLDRSGDDMD
VMRKAIIEEF ESLSAVAEEN AAASEEVSAS TEEQTASIEE ISNASDYLSE LASKLNSLVT
EFKL