| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3438 |
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| Symbol | tgt |
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| ID | 5743550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4229356 |
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| End bp | 4230492 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294551 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001560530 |
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| Protein GI | 160881562 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000261691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTACAAAT TAATCTGTAA GGATGGAAAT GCGAAGCGTG GCGAATTTAC AACGGTACAC
GGGAAAATAC AAACCCCAGT ATTTATGAAT GTCGGTACGG CAGCAGCCAT TAAAGGTGCA
GTATCCACAA TGGATTTGCA GGAAATAGGA ACACAAGTTG AACTAAGTAA CACCTATCAT
CTTCATGTAA GACCCGGAGA TGAAGTTGTA AAGAAATTGG GAGGTCTTCA TAAATTTATG
GTATGGGATA AACCTATACT AACAGACTCA GGTGGATTCC AAGTGTTTTC CTTGGCCGGT
CTTAGAAAGA TAAAGGAAGA AGGAGTATAC TTTAACTCTC ATATTGATGG AAAAAAGATT
TTTATGGGAC CTGAAGAGAG TATGAGAATA CAGTCTAATC TGGCATCTAC TATCGCCATG
GCGTTTGATG AATGCCCACC ACATCCAGCA ACTAGAGAAT ATATGGAGGA TTCAGTTGCT
AGAACCACAC GTTGGTTATT AAGATGTAAG AATGAGATGA ATCGATTGAA TACTCTTGAG
GATACGATTA ACAAACATCA GATGTTATTT GGTATCAATC AAGGTGGAAC CTATACAGAC
ATTCGTGTTG AACATGCGAA GAGAATTTCA GAGCTTGATT TGGATGGTTA TGCTTTAGGT
GGACTTGCCG TCGGAGAGTC CCATAGTGAG ATGTACCGGA TTATTGAAGA AACAGTGCCT
TATCTTCCAG AGGCTAAACC TACTTACTTG ATGGGGGTAG GAACTCCTGC AAATATATTG
GAAGCGGTAG AGCGTGGAGT AGACTTCTTT GATTGTGTAT ATCCAGCACG AAATGGTAGA
CATGGTCATG CGTATACAAA CCATGGAAAA ATGAATCTTC TTAATGCAAA GTATGAGCTA
GATGATCGTC CAATCGAAGA AGGATGTGGT TGTCCTGTTT GTAAAAACTA TAGCCGTGGC
TATATCCGCC ATCTATTAAA GGCAAAAGAA ATGCTTGGGT TACGCTTTTT AGTAACACAT
AACCTTTACT TTTATAACAA GATGATGGAA GAGATTAGGG AAGCAATCGA AAATCAAAAT
TTTGCAAGTT ATAAGAAGAA GAAATTAGAA GGATTTGCTG CAGAACAAGG AAATTAA
|
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| Protein sequence | MYKLICKDGN AKRGEFTTVH GKIQTPVFMN VGTAAAIKGA VSTMDLQEIG TQVELSNTYH
LHVRPGDEVV KKLGGLHKFM VWDKPILTDS GGFQVFSLAG LRKIKEEGVY FNSHIDGKKI
FMGPEESMRI QSNLASTIAM AFDECPPHPA TREYMEDSVA RTTRWLLRCK NEMNRLNTLE
DTINKHQMLF GINQGGTYTD IRVEHAKRIS ELDLDGYALG GLAVGESHSE MYRIIEETVP
YLPEAKPTYL MGVGTPANIL EAVERGVDFF DCVYPARNGR HGHAYTNHGK MNLLNAKYEL
DDRPIEEGCG CPVCKNYSRG YIRHLLKAKE MLGLRFLVTH NLYFYNKMME EIREAIENQN
FASYKKKKLE GFAAEQGN
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