| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3421 |
|---|
| Symbol | |
|---|
| ID | 5743704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 4201477 |
|---|
| End bp | 4202412 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 641294533 |
|---|
| Product | diacylglycerol kinase catalytic region |
|---|
| Protein accession | YP_001560513 |
|---|
| Protein GI | 160881545 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.561701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGAA AGATGTTATT TATCTATAAT CCAAATGCAG GTAGAGGTAG AATACGTACG
AAGCTTTCAC AGATTCTAGA GATATTCTTA AGGACAGATT GTGAAATTGT AATATACCCA
ACCAAACAAA AAATGGATGC CAGAGAGATA GCAAAGGAAT ATGCAACCAA AAACGAATGT
GATGCCATTG TATGTTCTGG TGGGGATGGA ACTTTGAATG AGGTAGTAGG AGGACTTATG
GAAGTTGGTT GTTCGTTACC GGTTGGCTAC ATACCTTCCG GTACAACAAA TGACTTCGGC
TATAGTCTAA ATATTCCAAA GAACATGGTG AAGGCTGCTG AAATCATTGT AAAAGGTGCT
ACCTTATTAT GTGATGTGGG GTCAATGAAT AATTCGTACT TTACTTATAC AGCAGCATTT
GGATTATTTA CAGATGTTTC TTATGATACT CCACAAAACT TTAAGAATGT ACTTGGTCGT
ATGGCATACA TTTTAAGTGG TATCAGTAAA CTTCACAGCG TTAAGGTTTA CCATCTTCGC
ATTGAGCATG AGGACGAAGT CTTAGAGGAT GATTTTATTT ATGGCATGTT AGCGAATTCG
AATTCGATCG GCGGTTTCCG GGGGATAACT GGATCAAAAG TACTGCTAAA TGATGGATTA
TTTGAATTAA TCTTAATTCG TAGGCCAAAT AATCTGGTTG AGCTAAGTGG TATCATCAAT
GATTTGGCGC ATAATGTACT CACTGGAAAG AACATATATT ATCATCGTGT CCATTCTGTT
AAGATTATTT CAGAAAGTGA CATGCCTTGG TCCTTAGATG GGGAATATGG TGGTACTACA
ACGGAAGCAA ACATTGTAAT ACATAAAGAA GCCATACCTT ATATCTGTGA CCGTTCGGAA
TTGCTCGAAT CAAAAGAAAC GTTAGAAATA CTATAA
|
|---|
| Protein sequence | MRRKMLFIYN PNAGRGRIRT KLSQILEIFL RTDCEIVIYP TKQKMDAREI AKEYATKNEC
DAIVCSGGDG TLNEVVGGLM EVGCSLPVGY IPSGTTNDFG YSLNIPKNMV KAAEIIVKGA
TLLCDVGSMN NSYFTYTAAF GLFTDVSYDT PQNFKNVLGR MAYILSGISK LHSVKVYHLR
IEHEDEVLED DFIYGMLANS NSIGGFRGIT GSKVLLNDGL FELILIRRPN NLVELSGIIN
DLAHNVLTGK NIYYHRVHSV KIISESDMPW SLDGEYGGTT TEANIVIHKE AIPYICDRSE
LLESKETLEI L
|
|---|
| |