| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3406 |
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| Symbol | |
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| ID | 5743683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 4168817 |
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| End bp | 4170628 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294512 |
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| Product | histidine kinase internal region |
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| Protein accession | YP_001560498 |
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| Protein GI | 160881530 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2972] Predicted signal transduction protein with a C-terminal ATPase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.264135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAG CCCATGAGTG GATGAAGCAT CTTAGTTTAA AGAAAAAGAT AATTCTATAC
AGCTATTTTG TAGTAACGCC TGTTCTTTTG ATTATTAGTA TAATATTGTT CTTAAATAAT
TATAAGAAAA TGATACAAAA ACAACATGAA GAAAACTTAA ACAGCGTCAG AAGCTTAGTA
AATAGTTTGG ACGTTATTGA AACAGAGGTA ACGGATTTGT CTTTGTATAT CTGCATTAAT
AATGATATTA CTAAGATATT GAAATCAGAG AATCCCTCAG AGCTGAATAA AGATTCTAGA
CTGTGGTTAA ATCGTGCTCC AATGAAAATT ATACAGGACA TGATTGCATT AAAGGGCTAT
ATTAAAACAA TCGCAATCTA TCCGGAAAAT GGTGTCAGAC CTTATTTAAG ATGTATTGAC
GCTACCTCTT ATCTGCCTAG CATAGAAGAA GTTAGAAATA TCGAAATCTA TCAAAAGTCA
TTGAAAGGTA AAGGCACTGT ATACTGGCAG AGGGTTTCAA GAACAGATAA AAGTACATAT
CAGGCAAATC GTACCGACAA AATTGTAATG TATCGAGGAA TGTATGATTT GGCGAAAAAG
ACTCCGCTTG GGTATCTGGT TATAGGTATT GCTGCTGAAA AATATACCGA TCTTTGTGTA
AATGCTATCC AGCAGCAGAA TGAAGGTATC GTTGTATTTA GCGCTGAAGG TATAGAGCTG
ACGAGGTACG GAAAAGTAGA TGGAGAAATA GTTAGATACA TTCAAGGTGA GAACTACATA
CAAAAAGATC ATCGACAGAG AGAGAGTCAG TTAACTCTTG GTGACTATAA TGTTTTTTGC
AGTCAGAACA AGGAAAATGG AGTATTGGTA TGCAAGATGG TACCAAAGAG TAATGAAAAG
GGACCTATGT ATACCATTAC ATCAGCTCCT ATTACCTTAT TAATTGCTGT ATTGATTGGG
TTATTCCCTG TACTAATGTT TATATCTGCA ATTGTATCAA AGCCTCTTGG CAGATTGTGC
AGAGCGATGG AGCAGTTTAA GTTAGGAGAT TTCAATCAGC AGGTGGAGGT AACCGCGTAT
GATGAAGTGG GAGAAGTAAC AGAATGTTTT AATCAGATGG TTGTAGAAAT CAAAGAACTG
ATTAATAATA ACTATGTTAT GGCACTGGCG GAGAAAGAAA GTGAACTTCG AGCACTACAG
GCACAGATTA ATCCTCATTT TTTATATAAT ACACTGGATT CCCTATATTG GCGCGCATTA
GATGCAGGAA ATGAAGAAAT TTCAGAGGAT ATCCTTGCAT TATCACAGTT ATTCCGTATG
GTTCTTTCAG AAGGAAAGGG CGTAACAACG GTGGCACAGG AGAAAGAGCT TTTAACGAGA
TATTTACATA TTCAGAAAAT GAGATTTTCT AAAAGATTAG ACTATAAAAT AGCGATAGAG
GAAGAGGTAT TGGAGGCTGT AATTCCTAAA CTTATTTTGC AGCCATTTGT TGAAAATGCT
ATCGTACATG GATTCGAAAA TGTTGGTACC GAATGCCTTT TATTAGTTAC GGGAAGTCTT
TCGGATAATC AAATCTTATT TTGCATTGAA GACAATGGCG CAGGGATGAC AAAAGAACAA
ATCGAGGCAA TCTGGAATGT AGAAGACTTT AAACGCTATG CAAATCAAAG GGTTGGCCGG
TATGCAATCA AGAATGTAAA AGAGAGATTA GAGCTAAAGT ATCAAGACAA TTTTATGCTT
ACCATTGAGA GTGAGAGAGG AAAAGGAACC ACTGTAACTA TTCGTATTCC ATTTGAAAAG
AAGGAGATTT AA
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| Protein sequence | MRRAHEWMKH LSLKKKIILY SYFVVTPVLL IISIILFLNN YKKMIQKQHE ENLNSVRSLV
NSLDVIETEV TDLSLYICIN NDITKILKSE NPSELNKDSR LWLNRAPMKI IQDMIALKGY
IKTIAIYPEN GVRPYLRCID ATSYLPSIEE VRNIEIYQKS LKGKGTVYWQ RVSRTDKSTY
QANRTDKIVM YRGMYDLAKK TPLGYLVIGI AAEKYTDLCV NAIQQQNEGI VVFSAEGIEL
TRYGKVDGEI VRYIQGENYI QKDHRQRESQ LTLGDYNVFC SQNKENGVLV CKMVPKSNEK
GPMYTITSAP ITLLIAVLIG LFPVLMFISA IVSKPLGRLC RAMEQFKLGD FNQQVEVTAY
DEVGEVTECF NQMVVEIKEL INNNYVMALA EKESELRALQ AQINPHFLYN TLDSLYWRAL
DAGNEEISED ILALSQLFRM VLSEGKGVTT VAQEKELLTR YLHIQKMRFS KRLDYKIAIE
EEVLEAVIPK LILQPFVENA IVHGFENVGT ECLLLVTGSL SDNQILFCIE DNGAGMTKEQ
IEAIWNVEDF KRYANQRVGR YAIKNVKERL ELKYQDNFML TIESERGKGT TVTIRIPFEK
KEI
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