Gene Cphy_3322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3322 
Symbol 
ID5741602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4045264 
End bp4046010 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content40% 
IMG OID641294423 
ProductRNA methyltransferase 
Protein accessionYP_001560414 
Protein GI160881446 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.752431 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATACG AAGAATTAAC AATGGTAGGT AGAAATGCTG TATTAGAAGC ATTTCGTGCG 
GGAAAGACAA TAGACCGATT ATTTATTTTA GATGGCTGTC AGGATGGTCC GATTAAATCA
ATTTTAAGAG AAGCAAAGAA GTACGATACC ATCATTACAT TCGTTAAGAA GGAACGTCTT
GATCAGATGT CTGAAGAAGG GAAACATCAA GGGGTTATTG CTTACGCAGC TGCCTATGAA
TATGCGGAAG TTGATGATTT GTTAGAGGCT GCAAAAGCAA AGGGAGAAGC ACCATTCTTA
ATTATATTAG ATGGAATTGA AGATCCCCAT AACTTAGGTG CAATGCTTCG AACTGCAAAC
CAAGCGGGAG CACATGGTAT CATTATTCCT AAGCGCCGTG CAGTAGGACT TACAGCTACT
GTAGCTAAGG TGAGCGCAGG AGCTATCAAT TATACACCAG TTGCTAAGGT TACCAACCTT
GTAGCAACCA TGGAGGAATT AAAACAAAAA GGCCTATGGT TTGTATGTGC CGATATGAGT
GGTGAAGTGA TGTACCGTCA GAATCTAACT GGACCAATCG GCTTGGTAAT TGGTAGTGAA
GGAGAGGGTG TTTCTCGACT TGTAAAGGAA AAATGTGATT TTGTAACTAA GATTCCTATG
GTAGGAGACA TCGATTCTCT TAATGCATCT GTTGCTATGG GTGTATTAAC TTATGAAATT
GTTAGACAGA GAAGTTTTGC GAAATAA
 
Protein sequence
MRYEELTMVG RNAVLEAFRA GKTIDRLFIL DGCQDGPIKS ILREAKKYDT IITFVKKERL 
DQMSEEGKHQ GVIAYAAAYE YAEVDDLLEA AKAKGEAPFL IILDGIEDPH NLGAMLRTAN
QAGAHGIIIP KRRAVGLTAT VAKVSAGAIN YTPVAKVTNL VATMEELKQK GLWFVCADMS
GEVMYRQNLT GPIGLVIGSE GEGVSRLVKE KCDFVTKIPM VGDIDSLNAS VAMGVLTYEI
VRQRSFAK