Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphy_3317 |
Symbol | |
ID | 5741596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium phytofermentans ISDg |
Kingdom | Bacteria |
Replicon accession | NC_010001 |
Strand | - |
Start bp | 4039364 |
End bp | 4040842 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641294418 |
Product | extracellular solute-binding protein |
Protein accession | YP_001560410 |
Protein GI | 160881442 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000142443 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACGAA AAATGATCGG CCTATTGTTA TGCTTAACGT TAGCAATTAG TTTGCTTTCG GGCTGCAAGA AAAATGATGC AAATTCTACC TCAGGCGATA CAAAGCCAAC AGATGCTGCA AAACAGACGA ATACTCCCGT ACCTACAAAA GAAGCAAGTA ATCCTGTAGA AAAAAAGATC CAGCTAAAAT TAGGTATCTG GCCAGAAGAT ACCCTTACTG ATGATATTAA TATGCACAAG GAATTTGTAA AGAGATTTAA TGAGACCCAT CCTAATGTTG AAGTAGTTCC TGCTTACTAT AAATACGCTG TTGATACCTT TGTTCCAAAG GCTGAGTCTG GTAACTTACC AACTATCTTT GAATCCTGGT ATACAGAGCC ACAGAAGTTA ATTGCAGGCG GATTTGTTGC TGATATCACA GATAATTTAC AGAAAAGAGG ATGGTTAGAT ACTCTTAATC CATCTATCCG TGATTTATTG TCCAAGGATG GAAGAATCTA TGGTATTCCA CGTGATGGTT ACGCTCTTGG CTTAATGCTA AATGTGGAAT TATTTGAAGA AGCAGGTCTT GTAGATGCCA ACGGTTACCC AATCTATCCA AAGACTTGGG ACGAATTAGC TGAGACAGCA AAGAAGATTA AAGATGCTAC TGGTATGGCA GGTATTTGCA TACTTGCTAA GGACGGTGCT GGTGGATGGC ATTTCTCCAA TATAGCATGG GCATTTGGTG CTACATTAAC CAAAGATAAT GGGGATGGAA CCTTTACTGC AAATGTAGAT TCCGCAGAAG CTATTGCAGC TATGCAATAT GTTAAAGATT TAAGATGGAA ATATGATGTT TTAACACCAG ATCCAATCAA CGAAGATTGG GGTACTGGCT TTGCTAACCT TGGTGTTGGA ACAGCAGCAA TGTACATAGC TGCGAATGAC GCAGTAAATC AGCCTACTCA GGTAAATGGT CTTCCTGTAG ACAAATTAGC TATGTGTGCT CTACCAGCAG GACCTAATGG TGCTCAGTAT TCTTTATCCG GCGGTACTCC ATACATGTTC TCTAAGGATG CTACTTCAGA AGAAATCGAT GCAGCTTTAG ATTATCTCGA GATTATGGGT AAAGCTCCTG TTGCTACTGA TGAAGCAATC GCTGGTATGA AGGCAGATGC TGAGAACAGA GTAGCAAATG GTGTTCCAGT AATTCCAAGA TTCCCATGCT GGATTGTTCA GAAAGTTTTA GACGCAGAAT CTCAGATTAT AAAAGATTAT GGTAACGTAG ATCCTAAGAT GTTTGAGAGT TATTTTAATG CAACAAAGCA AAGCGGAAAT CTTAGAATGG AAGAACCAGG TTCTGCTCAA GATTTATATG CAGAGTTAAC GAAAGTGTTA CAGGCTGTAG TTACAGATAA GGATGCAGAT GTTGCAGCAT TAATGCAAAA AGCAAATGCT AATTATCAAA GCATATTAGA TGATCTTTTC AAAAAATAA
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Protein sequence | MKRKMIGLLL CLTLAISLLS GCKKNDANST SGDTKPTDAA KQTNTPVPTK EASNPVEKKI QLKLGIWPED TLTDDINMHK EFVKRFNETH PNVEVVPAYY KYAVDTFVPK AESGNLPTIF ESWYTEPQKL IAGGFVADIT DNLQKRGWLD TLNPSIRDLL SKDGRIYGIP RDGYALGLML NVELFEEAGL VDANGYPIYP KTWDELAETA KKIKDATGMA GICILAKDGA GGWHFSNIAW AFGATLTKDN GDGTFTANVD SAEAIAAMQY VKDLRWKYDV LTPDPINEDW GTGFANLGVG TAAMYIAAND AVNQPTQVNG LPVDKLAMCA LPAGPNGAQY SLSGGTPYMF SKDATSEEID AALDYLEIMG KAPVATDEAI AGMKADAENR VANGVPVIPR FPCWIVQKVL DAESQIIKDY GNVDPKMFES YFNATKQSGN LRMEEPGSAQ DLYAELTKVL QAVVTDKDAD VAALMQKANA NYQSILDDLF KK
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