Gene Cphy_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3317 
Symbol 
ID5741596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp4039364 
End bp4040842 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content39% 
IMG OID641294418 
Productextracellular solute-binding protein 
Protein accessionYP_001560410 
Protein GI160881442 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000142443 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA AAATGATCGG CCTATTGTTA TGCTTAACGT TAGCAATTAG TTTGCTTTCG 
GGCTGCAAGA AAAATGATGC AAATTCTACC TCAGGCGATA CAAAGCCAAC AGATGCTGCA
AAACAGACGA ATACTCCCGT ACCTACAAAA GAAGCAAGTA ATCCTGTAGA AAAAAAGATC
CAGCTAAAAT TAGGTATCTG GCCAGAAGAT ACCCTTACTG ATGATATTAA TATGCACAAG
GAATTTGTAA AGAGATTTAA TGAGACCCAT CCTAATGTTG AAGTAGTTCC TGCTTACTAT
AAATACGCTG TTGATACCTT TGTTCCAAAG GCTGAGTCTG GTAACTTACC AACTATCTTT
GAATCCTGGT ATACAGAGCC ACAGAAGTTA ATTGCAGGCG GATTTGTTGC TGATATCACA
GATAATTTAC AGAAAAGAGG ATGGTTAGAT ACTCTTAATC CATCTATCCG TGATTTATTG
TCCAAGGATG GAAGAATCTA TGGTATTCCA CGTGATGGTT ACGCTCTTGG CTTAATGCTA
AATGTGGAAT TATTTGAAGA AGCAGGTCTT GTAGATGCCA ACGGTTACCC AATCTATCCA
AAGACTTGGG ACGAATTAGC TGAGACAGCA AAGAAGATTA AAGATGCTAC TGGTATGGCA
GGTATTTGCA TACTTGCTAA GGACGGTGCT GGTGGATGGC ATTTCTCCAA TATAGCATGG
GCATTTGGTG CTACATTAAC CAAAGATAAT GGGGATGGAA CCTTTACTGC AAATGTAGAT
TCCGCAGAAG CTATTGCAGC TATGCAATAT GTTAAAGATT TAAGATGGAA ATATGATGTT
TTAACACCAG ATCCAATCAA CGAAGATTGG GGTACTGGCT TTGCTAACCT TGGTGTTGGA
ACAGCAGCAA TGTACATAGC TGCGAATGAC GCAGTAAATC AGCCTACTCA GGTAAATGGT
CTTCCTGTAG ACAAATTAGC TATGTGTGCT CTACCAGCAG GACCTAATGG TGCTCAGTAT
TCTTTATCCG GCGGTACTCC ATACATGTTC TCTAAGGATG CTACTTCAGA AGAAATCGAT
GCAGCTTTAG ATTATCTCGA GATTATGGGT AAAGCTCCTG TTGCTACTGA TGAAGCAATC
GCTGGTATGA AGGCAGATGC TGAGAACAGA GTAGCAAATG GTGTTCCAGT AATTCCAAGA
TTCCCATGCT GGATTGTTCA GAAAGTTTTA GACGCAGAAT CTCAGATTAT AAAAGATTAT
GGTAACGTAG ATCCTAAGAT GTTTGAGAGT TATTTTAATG CAACAAAGCA AAGCGGAAAT
CTTAGAATGG AAGAACCAGG TTCTGCTCAA GATTTATATG CAGAGTTAAC GAAAGTGTTA
CAGGCTGTAG TTACAGATAA GGATGCAGAT GTTGCAGCAT TAATGCAAAA AGCAAATGCT
AATTATCAAA GCATATTAGA TGATCTTTTC AAAAAATAA
 
Protein sequence
MKRKMIGLLL CLTLAISLLS GCKKNDANST SGDTKPTDAA KQTNTPVPTK EASNPVEKKI 
QLKLGIWPED TLTDDINMHK EFVKRFNETH PNVEVVPAYY KYAVDTFVPK AESGNLPTIF
ESWYTEPQKL IAGGFVADIT DNLQKRGWLD TLNPSIRDLL SKDGRIYGIP RDGYALGLML
NVELFEEAGL VDANGYPIYP KTWDELAETA KKIKDATGMA GICILAKDGA GGWHFSNIAW
AFGATLTKDN GDGTFTANVD SAEAIAAMQY VKDLRWKYDV LTPDPINEDW GTGFANLGVG
TAAMYIAAND AVNQPTQVNG LPVDKLAMCA LPAGPNGAQY SLSGGTPYMF SKDATSEEID
AALDYLEIMG KAPVATDEAI AGMKADAENR VANGVPVIPR FPCWIVQKVL DAESQIIKDY
GNVDPKMFES YFNATKQSGN LRMEEPGSAQ DLYAELTKVL QAVVTDKDAD VAALMQKANA
NYQSILDDLF KK