| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3276 |
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| Symbol | |
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| ID | 5741555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 3985882 |
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| End bp | 3987255 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641294377 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001560369 |
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| Protein GI | 160881401 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000381455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGT CAAAATCTAA AATATACCAA AATGCTATTA CGGAAGGTCC AATCCTTACC
CGACTATTAA TATTTTTCTT TCCAATTTTG TTAGGCACCT TCTTTCAACA ACTGTATAAC
ACTTCAGATG CTATTATCGT AGGTAACTTC GTTGGAAAAC GTGCACTTGG AGCAGTAGGT
GGTACCACTG GAACCATAAT AAATCTCTTG GTTGGCTTTT TTGTTGGTCT TTCCTCTGGT
GCTACTGTAA TAATCTCGCA ATACTATGGT GCCAAGGCGG AAGAAGATGT AAAAAGTTCA
GTTCATACTT CATTTGCACT TGCAATTTGT GGTGGAGTCG TTTTAATGAT ACTTGGACTA
TATTTATCTC CAATAATGCT AACCTCAATG AATACCCCTG ATGATATTTA TCCACTATCC
CTACAATATA TAAGGATTTT CTTCCTTGGT ATTGTACCAA ATTTAGTTTA TAATATTGCC
TCTGGAATTC TTAGAGCGGT CGGTGATACC AAGCGACCTT TGTATTATTT AATCATCAGT
TGTTTTGTAA ATATTGTATT AGACCTACTT TTTGTTGGAG TTTTCCACAT GGGTGTAGCC
GGTGCTGCTA TTGCAACTAT AATCTCTCAA TTCGTTAGTG CAGTTTTAGT GGTCATGACT
TTATTGCGTA CAAATGAATC CTATCGTTTA GTTCCTAGGA ATATTCACTT TGAGGTACCA
ATCTTAAAAC GTATTGTAAA GATAGGGCTT CCCGCTGGAT TGCAGTCTGT AATGTATTCT
GTGTCGAATG TAATTATTCA AAGCCACATC AATTCGCTCG GAACTGACAC TGTTGCCGCT
TGGACTGCCT ATGGTAAAAT TGATGGTCTA TTTTGGATGA TCATTGGTGC TCTTGGTCTC
TCTGTAACTA CGTTTATCGG ACAAAATTAT GGGGCAAAAA AAGCTTCTCG AGTTCATAAA
TGCGTAAAAG TAGGACTTAT TTTGGCTTTT GGAATTTCTA TTTTACTTAG CATTGTTTTA
TATTTCCTTG GTCATTATGT TTTCCGACTA TTTACGGATG ATCAAATAGT ACTACAATTA
GGTATGAAGA TTCTCCATTT CCTTGCACCG ACCTTCTTTA CTTATGTATG CATCGAAATT
TTAGCTGCTG CACTACGTGG AATTGGCGAT GCGTTAGTCC CTATGATTAT AACCTGTCTT
GGCGTATGTG TTTTAAGAAT TGTTTGGCTA TATACCGCAG TACCATTGTC ACCTAATATC
ATTACTGTTA TCTTTAGTTA TCCACTTACT TGGGTAATAA CGTCATTACT GTTTATATTA
TATTATAGTT TCTTTAGCCA TCTTGGTTTC CGTAAGAGAG CACTGTATGA ATAA
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| Protein sequence | MQKSKSKIYQ NAITEGPILT RLLIFFFPIL LGTFFQQLYN TSDAIIVGNF VGKRALGAVG
GTTGTIINLL VGFFVGLSSG ATVIISQYYG AKAEEDVKSS VHTSFALAIC GGVVLMILGL
YLSPIMLTSM NTPDDIYPLS LQYIRIFFLG IVPNLVYNIA SGILRAVGDT KRPLYYLIIS
CFVNIVLDLL FVGVFHMGVA GAAIATIISQ FVSAVLVVMT LLRTNESYRL VPRNIHFEVP
ILKRIVKIGL PAGLQSVMYS VSNVIIQSHI NSLGTDTVAA WTAYGKIDGL FWMIIGALGL
SVTTFIGQNY GAKKASRVHK CVKVGLILAF GISILLSIVL YFLGHYVFRL FTDDQIVLQL
GMKILHFLAP TFFTYVCIEI LAAALRGIGD ALVPMIITCL GVCVLRIVWL YTAVPLSPNI
ITVIFSYPLT WVITSLLFIL YYSFFSHLGF RKRALYE
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