| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3258 |
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| Symbol | |
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| ID | 5742037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3963044 |
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| End bp | 3965569 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294359 |
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| Product | homocysteine S-methyltransferase |
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| Protein accession | YP_001560351 |
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| Protein GI | 160881383 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase
[TIGR02370] methyltransferase cognate corrinoid proteins, Methanosarcina family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.728955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA ATGAATTTAA AGCGATGATA GAACAGAAAA TCGTAATCCT TGATGGGGCA
ACGGGCAGTA ATCTACAAAA CGCTGGTATG CCTTCCGGTG TATGCCCTGA AACATGGATT
TTAGACAATA AAGAGGTCTT GATAACCTTA CAGAAAGAGT ATCTATATGC AGGTACGGAT
ATTCTGTATG CACCTACATT TACGAGTAAC CGAATCAAAC TTTCAGAATA TGGTTTAGAA
CATAGAATAG AGGAAATCAA TCATTCGTTA GTGGAATTAT CAAAAGAGGC AATCAATCGT
TACTTGGAGG AGACAGGGGA GACCCGCTCT ATTATGATAG CAGGTGACTT AACAATGACT
GGAGAGCAGT TATTGCCTTT TGGAAAGATG GATTTTGAAG AACTCATTAC GATTTATAAG
GAGCAAATAG GGCATTTAGT TTCATCGGGA GTAGATTTAC TTGTGGTGGA GACGATGCTA
AGTTTACAAG AATGTCGTGC TGCTGTGATT GCAGCAAAGG AAATTTGCGA GTTACCAGTC
ATGGTATCGT TAACCTTTGG TGAGGATAAT CGTACTCTTT ATGGAACAGA CCCAAAGACC
GCTATGATAG TTCTTCAAAG CTTGGGAGCA GATGCAGTCG GTGTTAATTG TTCGAGTGGA
CCTAAGAAGT TGAGCGAAGT GATAGAACAG ATGCTTCCAG TTGCCAATGT TCCTCTCATA
GCAAAACCTA ATGCTGGACT TCCAAAACTT GTAGAAGATA GAACAGTATT TACCATGGAT
GCCGATGAAT TTGCAGCAAG TTGTAAGATT TTTCTAGAGC TTGGTGTATC TATTCTTGGA
GGGTGTTGTG GTACGACACC AAAGCATATT AATTTATTAA ATGAATTAGC AAAGACTTAT
CAAGCACCCG TGATTCATAA AAAGCCTCTT AGAGTTTTAA CGACGGAGCG AAGGTCAATG
GAATTTTCTT TGGTGGATCG TTTCTTAGTT GTAGGAGAAC GAATAAATCC AACAGGAAAG
AAAGTGCTCC AGGCGCAACT TCGAGAAGGA GTTTTAGACT TAGTTAGTGA AATGGCAATT
GAGCAAGAGG AACTTGGTGC AGATATTTTA GATATTAATA TGGGGATGAA TGGCATTGAT
GAAAAAGAGA TGATGCTTAA GGTAATGGAT GAAGTACTCC AAGTAACAAA TCTACCGCTA
AGTATTGATT CTAGCCATGT TTCTGTTATA GAGGCAGCTC TTAGAAGATA CCCAGGGCGT
GCTCTTATCA ATTCCATCTC TTTAGAAAAA GAGAAGTTTG AAAAGCTACT TCCGGTTGCA
AAAAAATATG GTGCTATGTT TATTCTATTA CCATTATCAG ATGCTGGACT ACCGAAAGAC
CTAGAGGAAA AGAAACAGAT CATTCACACT ATCGTGTCTG CTGCTAAAGA AATTGGACTA
ACAGCTGAGG ATATTGTGGT GGATGGTTTA GTCAATACGG TTGGCGCGAA TAAAGAGGCA
GCGATCCAAA CGATGGAAAC AATAAGGTAT TGTAAGGAAG AACTTTCTCT TGCGACGATT
GTTGGACTAT CTAATATTTC GTTTGGTTTA CCGGAACGTC AATTTGTGAA TGCAACGTTT
TTATCCTTTG CAATACAGGC AGGCCTTACA ATGGCAATTG CAAATCCAAG CCAAGACCTT
CTTATGAACA CTGCTTATGC AGCAGATTTG CTAAGAAACA AAGAAGGTGC TGATCTTCGC
TATATAGAAC GTGTTACAAC ACACCCTATG ATAAATGCAG AAAGTACACC GAAAAAGGTG
ATTGAAAGGG GCGAGGATAA AGCGGATAAT AAAAAAAGTG TAAGAGAAGC TTCTAATGTT
AATGCAAATG AAAGTTTGAA TGATAATTCT ACTGAAAAGT CGAGTTCGCA AATATATGAA
GCAGTGATAA AAGGAAATAA AAGAAAAATT TTAGCACTTG TCATAGAGGA GGTTAATAAT
AAAACCTCAG CTGCCGAAAT ACTTGATACA ATACTAATTC CTGCCATAAA TCAGGTGGGA
CAGTATTTCG ACAGTGGGAA GTACTATTTA CCACAATTGA TTGCTTCAGC AGAAACCATG
AAGACTGCGA TCGATTATTT AGAACCTATG CTTAAAAAAG ATTCTAAAGA AGAAAAAGTA
GGTACTATCA TAATTGCAAC AGTTGCTGGG GACATTCATG ATATTGGGAA AAATCTTGTA
GCATTAATGC TTAAGAATTA TGGATTTAAT GTAATTGATT TGGGCAAGGA TGTTTCATCA
GAAAAAATTA TAGAAACAGC GAAGGAACTG GATGCAGATA TTATAGCTCT TTCTGCGCTT
ATGACTACTA CAATGCTTGA AATGAAAAGG GTTGTAAATT ATAGAAATGA AGCATCTCTA
AGAGCAAAGG TAATCATAGG TGGGGCCGTA ATTACTCAGG ATTATTGCGA TGAAATTGGC
GCTGATGGTT ATTCCAAAGA TGCACAAGAA GCAGTCAATT TAGTAAAAAA ATTATTAAAA
ATATAA
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| Protein sequence | MTKNEFKAMI EQKIVILDGA TGSNLQNAGM PSGVCPETWI LDNKEVLITL QKEYLYAGTD
ILYAPTFTSN RIKLSEYGLE HRIEEINHSL VELSKEAINR YLEETGETRS IMIAGDLTMT
GEQLLPFGKM DFEELITIYK EQIGHLVSSG VDLLVVETML SLQECRAAVI AAKEICELPV
MVSLTFGEDN RTLYGTDPKT AMIVLQSLGA DAVGVNCSSG PKKLSEVIEQ MLPVANVPLI
AKPNAGLPKL VEDRTVFTMD ADEFAASCKI FLELGVSILG GCCGTTPKHI NLLNELAKTY
QAPVIHKKPL RVLTTERRSM EFSLVDRFLV VGERINPTGK KVLQAQLREG VLDLVSEMAI
EQEELGADIL DINMGMNGID EKEMMLKVMD EVLQVTNLPL SIDSSHVSVI EAALRRYPGR
ALINSISLEK EKFEKLLPVA KKYGAMFILL PLSDAGLPKD LEEKKQIIHT IVSAAKEIGL
TAEDIVVDGL VNTVGANKEA AIQTMETIRY CKEELSLATI VGLSNISFGL PERQFVNATF
LSFAIQAGLT MAIANPSQDL LMNTAYAADL LRNKEGADLR YIERVTTHPM INAESTPKKV
IERGEDKADN KKSVREASNV NANESLNDNS TEKSSSQIYE AVIKGNKRKI LALVIEEVNN
KTSAAEILDT ILIPAINQVG QYFDSGKYYL PQLIASAETM KTAIDYLEPM LKKDSKEEKV
GTIIIATVAG DIHDIGKNLV ALMLKNYGFN VIDLGKDVSS EKIIETAKEL DADIIALSAL
MTTTMLEMKR VVNYRNEASL RAKVIIGGAV ITQDYCDEIG ADGYSKDAQE AVNLVKKLLK
I
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