Gene Cphy_3222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3222 
Symbol 
ID5742000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3926521 
End bp3927549 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content34% 
IMG OID641294322 
Productribonucleoside-diphosphate reductase 
Protein accessionYP_001560315 
Protein GI160881347 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0208] Ribonucleotide reductase, beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA AGAAAATTTT TAATGAGTAT GGAGATCGTG GTACCGATTG TTTAATTAAG 
GGAAATACAA CGAATCTAAG AGAGTGGAAT CGTATCAAAT ACGACTGGGC TCGTTTGATT
TATCGTACAA TGCTTAATAA CTTTTGGATA CCAGAAGAAA TTTCACTGCA AGAGGATGTA
AAACAATTTC CTTACTTAAC AGATGGAGAA CGGAATGCCT TCGATAAAAT CATCGCATTC
CTCAACTTCT TAGATTCGAT ACAAAGTGAA AATCTACCGA ATATATCAAG GTATATTACA
GCTCCAGAAG TATCCTCCTT GCTAAATGTC CAAGCATTTC AAGAGGAAAT TCATGCACAA
AGTTACTCCT ATATCTTAGA TACCGTGACA AATCCAGTGA CGAGAGATCG AATATATGAT
ATATGGAGAG AGGATAAGTA TCTTTTGGAA CGTAATAAAT TTATTGCAAA TATTTATCAG
AGATTTAGTG ATGAACCTAG TGATGAAAAT TTTGTACGTG TAGTATTTGC AAATTATATT
CTTGAGGGAA TTTATTTTTA TTCCGGGTTT AGTTTTTTCT ATACACTAGC AAGGCAAGGA
AAGATGACAG CTACCAGTAC AATTTTTAAA TATATCAACC GAGATGAAAT TACTCATTTG
GTACTATTTC AAAATATCAT GAAAGAGCTT CGTGTTGAAC AGAAAGAGAT GTTTACCAAA
GGCTTAGAGG AGGAACTTCG TGAGATGATG AGAACTGGTG TTGAGCACGA AATTGCTTGG
GGCCAATATG TTACGGATAA CCAGATACTT GGCATCAATA ATGAACTAAT TGATCAATAT
ATTAAGTATT TATCCAATCA AAGATTACGG GCAGTTGGTT TAGAAATACT TTATCCGGAA
ATTACGAAAC ATCCAATGGA ATGGATAGAG TCATTCTCTA ACATCAATAG TACGAAGACT
GACTTTTTCG AAGCAAAAGT AACGAATTAT ACAAAAGCAG CGGTATTTGA TTTTGACGAT
TTGCAGTAG
 
Protein sequence
MEKKKIFNEY GDRGTDCLIK GNTTNLREWN RIKYDWARLI YRTMLNNFWI PEEISLQEDV 
KQFPYLTDGE RNAFDKIIAF LNFLDSIQSE NLPNISRYIT APEVSSLLNV QAFQEEIHAQ
SYSYILDTVT NPVTRDRIYD IWREDKYLLE RNKFIANIYQ RFSDEPSDEN FVRVVFANYI
LEGIYFYSGF SFFYTLARQG KMTATSTIFK YINRDEITHL VLFQNIMKEL RVEQKEMFTK
GLEEELREMM RTGVEHEIAW GQYVTDNQIL GINNELIDQY IKYLSNQRLR AVGLEILYPE
ITKHPMEWIE SFSNINSTKT DFFEAKVTNY TKAAVFDFDD LQ