Gene Cphy_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3122 
Symbol 
ID5743208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3819042 
End bp3819887 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content38% 
IMG OID641294222 
Product2-oxoglutarate ferredoxin oxidoreductase subunit beta 
Protein accessionYP_001560217 
Protein GI160881249 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGAAT TCAAAACGTA TGAAACAGCA TGGTGTCCAG GGTGCGGTAA TTTTAGTATT 
CTACAATGTC TTAAGACAGC GCTAGAAGAA TTAAAGAAAG ATCCTTATGA AGTTTTAATG
GTAGGTGGAA TTGGTCAGGC AGCGAAGACA CCTCAATATA TTAGTGCAAA TAGTTTTTGT
GGACTACACG GAAGATCATT ACCGGCAGCA GTTGCTGCTA AGATTGCAAA TGAAAAACTG
ACGGTAATTG TAGACACAGG AGACGGCGAT TCTTATGGCG AAGGTGGTAA TCATTTTATT
CATAACATCA GGAGAAATGT TGGTATTACG CACTTTGTTC ATGATAATCA GATTTATGGT
TTAACGAAAG GTCAGGCTTC CCCTACGACA TCAGAAGGAC AGATTACTGG TGTTCAAGTA
ACTGGTAGTG TGAATACTCC TCTAAACCCA GTTCTTATGG CGATAGCAGC AGGAGCAGGG
TTTGTAGCCA GAGCATTTAG TGGAGATACC AAACACTTAA CTGAGATTAT GAAACAGGCA
ATTACTTATC CTGGTTATGC AATAGTAGAT ATATTACAAC CTTGCGTTAC CTTTAACAAA
GTAAATACGT ATGCCTATTA TAAGAGTAGA GTATATCACT TGGAGGAAGA CTATGATTCT
TCCAATAAAC TAGAGGCTAT GGAACGTGCA ATGGAATTTG ATGATAGAAT TCCAATTGGC
GTGTTATATC AAGAACAAAA ACAAACCTTC CATCAAAAAA ATATTGTTCT AGCAGGAAGA
GAGCCACTGG TTGAACGGCA AAGAGATAGC ACGGTTATTA AGCAATTAAT GAATGAATTT
GTATAA
 
Protein sequence
MCEFKTYETA WCPGCGNFSI LQCLKTALEE LKKDPYEVLM VGGIGQAAKT PQYISANSFC 
GLHGRSLPAA VAAKIANEKL TVIVDTGDGD SYGEGGNHFI HNIRRNVGIT HFVHDNQIYG
LTKGQASPTT SEGQITGVQV TGSVNTPLNP VLMAIAAGAG FVARAFSGDT KHLTEIMKQA
ITYPGYAIVD ILQPCVTFNK VNTYAYYKSR VYHLEEDYDS SNKLEAMERA MEFDDRIPIG
VLYQEQKQTF HQKNIVLAGR EPLVERQRDS TVIKQLMNEF V