| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3086 |
|---|
| Symbol | |
|---|
| ID | 5743172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium phytofermentans ISDg |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010001 |
|---|
| Strand | - |
|---|
| Start bp | 3774879 |
|---|
| End bp | 3775286 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641294186 |
|---|
| Product | amino acid-binding ACT domain-containing protein |
|---|
| Protein accession | YP_001560181 |
|---|
| Protein GI | 160881213 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4747] ACT domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAGC AGTTATCCGT ATTCGTTGAA AACAAAGTAG GAAGTCTTAG AAAAGTAACA
AGTGCACTTA GTGAGAATGG TATTAATTTA CGAGCAATTT CTGTATTTGA CTCACCGGAT
TTTAGTATAT TACGAATTAT TATTGATGAA CCTGAAAAAG CAAAATTAGT TCTTTCCGAC
AAGGGATTTG CGGTTAAGGT TTCGGATGTA CTAGCAGTTG AATTGATGGA TAAGCCAGGG
GATTTGGATC GGGTGCTTGC TATTTTAGAA GACCACAATC TAAGCATTAA TTATATCTAT
TCCTTTGTAC TTCGTGGAGA AAAAGCACCA TTGATGGTAC TAAACATTAA TGATATGAAA
AAAGCGGAAG AAGTGTTACG TGAAAATAAG GTGTGTATAA TCGAATAA
|
|---|
| Protein sequence | MIQQLSVFVE NKVGSLRKVT SALSENGINL RAISVFDSPD FSILRIIIDE PEKAKLVLSD
KGFAVKVSDV LAVELMDKPG DLDRVLAILE DHNLSINYIY SFVLRGEKAP LMVLNINDMK
KAEEVLRENK VCIIE
|
|---|
| |