| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3054 |
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| Symbol | |
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| ID | 5743380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3734795 |
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| End bp | 3735646 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641294155 |
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| Product | spermidine synthase |
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| Protein accession | YP_001560150 |
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| Protein GI | 160881182 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTTT GGTATACAGA TCAACACACA AAAGACGTAC GCTTTTCTAT CAAAATGAAA
GAGCAGCTAG TTAGTGTAGA AAGTGAGTTT CAACGGATCG ACATCATCGA AACCTACGAA
TACGGACGTG TACTTGTATT AGATGGGGAA ATGATGATAA CGGAAAAGGA TGAATTTATC
TATCATGAGA TGATAACGCA TGTTCCTATG GCAGTTCATC CGAATATCCG TAATGTCCTT
GTGATTGGAG CAGGAGATGG TGGAACGATT CGGGAGCTAA CAAAATACGA TACGATAGAG
CATATCGATA TGGTGGAAGT TGACAAAGAA ATTGTACAAG TTTGTAGAGA ATATATGCCT
TTTACGGCTT GTAAGTTAAA TGATAAAAGA GTATCGATGC ATTTTGAAGA AGGATTACGT
TTTGTCCGTG GAAAACAAGA TGAATACGAT TTGATTATAG TTGATTGTGC TGATCCATTC
GGACCAGCAG AAGGTTTATT TACAAGAGAA TTTTACGGAA ACTGTTATAA GGCACTTCAT
GATGACGGAA TCTTAATCAA TCAGCACGAA AGCCCATTTT ACAATGAGCA TTCCGGAAGT
GTACAAAAAG CACATCGTCA TATTACAGCT GTATTTCCGT TAAGCACAGT GTATCAATGT
CATATCCCTT CCTACCCATC TGGACACTGG TTGTTTGGAT TTGCATCAAA GAAATATGAC
CCGATTAAGG ACTTAAACGA CAAGAAATGG AACGAGCTTA AACTACCTGT TCGATATTAC
AATACCGATT TGCACAAAGG ATGTTTCTAT CTACCAAATT ACGTAAAGGA GTTGTTAGGC
AGCTATGAAT AA
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| Protein sequence | MELWYTDQHT KDVRFSIKMK EQLVSVESEF QRIDIIETYE YGRVLVLDGE MMITEKDEFI
YHEMITHVPM AVHPNIRNVL VIGAGDGGTI RELTKYDTIE HIDMVEVDKE IVQVCREYMP
FTACKLNDKR VSMHFEEGLR FVRGKQDEYD LIIVDCADPF GPAEGLFTRE FYGNCYKALH
DDGILINQHE SPFYNEHSGS VQKAHRHITA VFPLSTVYQC HIPSYPSGHW LFGFASKKYD
PIKDLNDKKW NELKLPVRYY NTDLHKGCFY LPNYVKELLG SYE
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