Gene Cphy_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphy_3036 
Symbol 
ID5743362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium phytofermentans ISDg 
KingdomBacteria 
Replicon accessionNC_010001 
Strand
Start bp3712064 
End bp3713209 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content35% 
IMG OID641294137 
ProductApbE family lipoprotein 
Protein accessionYP_001560132 
Protein GI160881164 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.31252e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT ACCATATGAT TAATATAATA AAACATAAAA ACCAAAAATC AGATCTTAAC 
AATAATTCAA ATCAAAATAA GGGCTTTTTT ACAAAACGTA CAATTAAGTT TTTAACACTA
ATCACTCTCA GTACCGTGAT GTTAACTTTC AATGCTTGTG CCAAAAAAAC ACCCTCAAAA
GATTCGCCAG AACCTACTCC TACCATAGCG GAAAAGGAAG GTACTACTCC TATCTCGAAA
AGTTCCTTTA AGTTAAATAC TGTCGTGTCC ATTACTTTAT ATGACAGTGA AGATGAGAGG
ATTATTGATG AAGCTTTTCA ATTATGCGAT TATTATGAAA ACCTATTAAG CAGAACGAAG
AAAGAAAGCG AAATCTATCA ACTAAATGAA AAAGCTCATA ATAGTTATAC GGTTTCCGAT
GAAACCAAAG AGCTCTTAAC AAAAGGATTC CTTTACAGTC AACTTTCTGA TGGAGCTTTT
GATTTAACGC TAGAACCACT CACAAGTCTC TGGAATTTCG GTTCAAGCGA GGAACGTCTT
CCAAGTCCGG ATGAAATTAA GGAAGCGTTA ACTCATATTG GATATCAGTA CTTAAAATTA
GATGGCAACA CGATTACTTT TGAGAAAGAT GGTATGGGGA TTGATTTAGG AGCCATCGCA
AAAGGTTACA TCGCTGATAA AATAAAAGAA TTTTTAGTTT CTAAAGGTGT CAATAGCGCT
ATTATTAATT TAGGCGGTAA CATTTTGTGT GTTGGTGAGA AGCCAGATGG TTCTGCCTTT
AAGGTAGGAA TTCAAAAACC ATTTAAAGAT CGTAACGAAA CAATTGCAGT GATAGAAATT
CGTGACCTAA CAGTTGTGTC ATCCGGTATC TATGAGCGTT TCTTTACCGT TGACGGCAAG
AATTATCATC ACATATTAAA TCCATCCACT GGATATCCTT ATGAAAATGA TCTTACTTCA
GTAACTATAG TTACGAAAGA ATCTGTGGAC GGTGATGCAT TAAGTACCAC TTGTTTTGCA
CTAGGCCTAG AGAAGGGAAT GAAATTGATT GAATCATTAC CTGATACCTA TGCTGTATTC
ATAACATCGG ATTATGAACT ACATTACACC AAAGGTTTCA AAGAAAATAT AAAGATTGTA
GAGTAG
 
Protein sequence
MRKYHMINII KHKNQKSDLN NNSNQNKGFF TKRTIKFLTL ITLSTVMLTF NACAKKTPSK 
DSPEPTPTIA EKEGTTPISK SSFKLNTVVS ITLYDSEDER IIDEAFQLCD YYENLLSRTK
KESEIYQLNE KAHNSYTVSD ETKELLTKGF LYSQLSDGAF DLTLEPLTSL WNFGSSEERL
PSPDEIKEAL THIGYQYLKL DGNTITFEKD GMGIDLGAIA KGYIADKIKE FLVSKGVNSA
IINLGGNILC VGEKPDGSAF KVGIQKPFKD RNETIAVIEI RDLTVVSSGI YERFFTVDGK
NYHHILNPST GYPYENDLTS VTIVTKESVD GDALSTTCFA LGLEKGMKLI ESLPDTYAVF
ITSDYELHYT KGFKENIKIV E