| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_3009 |
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| Symbol | |
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| ID | 5743335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | - |
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| Start bp | 3672467 |
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| End bp | 3674620 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641294110 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001560105 |
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| Protein GI | 160881137 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.414212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAG AGAAGACACA ACAAGAATTT CAACAACGAG CAACAGAACT TGTAAAGAAA
ATGACACTAG AAGAAAAAGT TTTTCAAACC TTACATTCCG CACCTTCCAT ACCAAGATTG
GACATTAAAG CGTACAATTA TTGGAACGAA GCATTGCATG GAGTAGCAAG AGCTGGCGTA
GCCACCGTTT TTCCGCAGGC GATTGGTTTA GCGGCAACAT TTGATGAAGA TTTAATCGAA
GAGATTGCAG ATACTATTTC TACCGAAGGA AGAGGTAAGT TTAATGCACA ACAAAAATAT
GGAGATCACG ATATCTACAA AGGTTTGACC TTCTGGTCAC CGAATGTGAA TATCTTCCGT
GATCCACGTT GGGGTCGTGG ACATGAGACC TTCGGAGAAG ACCCATTCTT AAGTGGTACC
TTAGGAGGAC GTTTTGTTGA CGGTATCCAA GGGCATGATG AAACCTACTT AAAAGCAGCA
GCTTGTGCAA AGCATTTCGC AGTTCACTCT GGACCAGAAG ATATTCGCCA TAGTTTCAAT
GCCGAAGTTT CGGAGCAGGA TTTGCGTGAA ACTTATCTAC CAGCTTTTAA GAAACTTGTA
AAAGAGCATA AGGTGGAAGC AGTAATGGGA GCTTACAATC GTACAAATGG AGAACCATGC
TGTGGTAGTA AGACACTTTT AGAAGATATT TTACGTGGAG AATGGGAATT TGTTGGTCAT
GTGACCTCAG ATTGTTGGGC AATCAAAGAT TTCCATGAGC ACCATATGGT TACTTCAAAT
GCAGTAGAGT CAGTTGCCTT GGCAATGAAT CGTGGTTGCG ACTTAAACTG TGGAAATCTT
TATGTTAATT TACTACAAGC AGTACGGGAT GGTTTAGTGG AAGAAGAGAC AATTGATACT
GCTCTTATAC GTCTCTTTAC AACAAGAATG AAACTCGGAT TATTTGATAA AGAAGAATCG
ATTCCGTTTA ACACAATTAC ATATGACCAA GTAGATACGA AGTCAAGCAA AGAGCTTAAT
ATCAAAGCCT CCAAAAAGTG TGTTGTGTTA TTAAAAAATG AGGATAATAT ATTGCCTCTT
AATCCAAAGA AAATTACCTC TGTCGGAGTT ATTGGGCCTA ATGCGAATAA TCGTAATGCG
TTGGTGGGGA ATTACGAAGG AACAGCGTCA GAATACATTA CTGTATTAGA GGGAATCAAG
CAAGTTGTCC CAGAAGATGT TAGAGTATAC TTTTCGGAAG GTTGTCATTT ATTTAAAAAT
AAACTCTCTA ATTTAAGTCA GGAAAATGAC CGTATTGCTG AGGTACGTGC AGTTTGTGAA
CATAGTGATG TCGTAATAGC ATGCCTGGGT CTTGATCCAG GATTAGAAGG AGAAGAAGGC
GACCAGGGAA ATCAATTTGC TAGTGGAGAT AAGAAGACAT TAGCGCTTCC TGGAATTCAA
GAAGATGTAT TAAAAACTAT TTATGAATGT GGAAAACCTG TTATTTTAAT CCTTCTCTCC
GGTAGTGCTT TGGCAGTGCC ATGGGCAGAT GAGCATATTC CTGCTATATT ACAAGGCTGG
TATCCTGGAG CACAAGGTGG TAGAGCGATT GCAGAATTGA TTTTTGGAGA TGGAAACCCA
GAAGGAAAGC TTCCTGTAAC ATTCTATCGT ACGACTGAGG AATTACCTGA GTTTACAGAT
TATGCTATGA AGAACCGTAC GTATCGTTAT ATGAAGAATG AGGCTCTTTA TCCATTTGGA
TATGGCTTAA GTTATACTAC CTTTGAGCAC ACATTACTTT ATGTAAATAC AGATACTTTA
GGAAAAGGTT CCAACGTAGA GTGTATGGTA AGAGTAAAGA ATACCGGTGA TTATGAAGGT
TCGGTGACAA CACAAGCATA TGTTAAATAT GTAGGAGAAG ATGCTCCAAA CTGTCAGCTA
AAAGGCCTTA AAAAAGTGAG CTTACTCCCA GGAGAAGAAA AAGATATCAT GATTGAGTTA
GATGACAGAG CCTTTGGTTT ATATAATGAG GAAGGTGAAT TTATCTTAAA TCAAGGGGAG
TATGAGCTAT ATCTAAGTGA TTCACAACCA GATACTAGAA GTATTCAGTT AACTGGTAAG
AATCCAATTA AAATACAGTT CCATGCACCT GAAACAGTTT TACTTGGTGA GTAG
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| Protein sequence | MTAEKTQQEF QQRATELVKK MTLEEKVFQT LHSAPSIPRL DIKAYNYWNE ALHGVARAGV
ATVFPQAIGL AATFDEDLIE EIADTISTEG RGKFNAQQKY GDHDIYKGLT FWSPNVNIFR
DPRWGRGHET FGEDPFLSGT LGGRFVDGIQ GHDETYLKAA ACAKHFAVHS GPEDIRHSFN
AEVSEQDLRE TYLPAFKKLV KEHKVEAVMG AYNRTNGEPC CGSKTLLEDI LRGEWEFVGH
VTSDCWAIKD FHEHHMVTSN AVESVALAMN RGCDLNCGNL YVNLLQAVRD GLVEEETIDT
ALIRLFTTRM KLGLFDKEES IPFNTITYDQ VDTKSSKELN IKASKKCVVL LKNEDNILPL
NPKKITSVGV IGPNANNRNA LVGNYEGTAS EYITVLEGIK QVVPEDVRVY FSEGCHLFKN
KLSNLSQEND RIAEVRAVCE HSDVVIACLG LDPGLEGEEG DQGNQFASGD KKTLALPGIQ
EDVLKTIYEC GKPVILILLS GSALAVPWAD EHIPAILQGW YPGAQGGRAI AELIFGDGNP
EGKLPVTFYR TTEELPEFTD YAMKNRTYRY MKNEALYPFG YGLSYTTFEH TLLYVNTDTL
GKGSNVECMV RVKNTGDYEG SVTTQAYVKY VGEDAPNCQL KGLKKVSLLP GEEKDIMIEL
DDRAFGLYNE EGEFILNQGE YELYLSDSQP DTRSIQLTGK NPIKIQFHAP ETVLLGE
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